Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:136975156-138655440

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmsb15l X 136954988 to 136976869 21881 - protein coding gene thymosin beta 15b like
Tmsb15b1 X 136974022 to 136976874 2852 - protein coding gene thymosin beta 15b1
Tssr164204 X 136976833 to 136976857 24 - TSS region transcription start site region 164204
Tssr164205 X 136976859 to 136976883 24 - TSS region transcription start site region 164205
Slc25a53 X 136981116 to 137038302 57186 - protein coding gene solute carrier family 25, member 53
Zcchc18 X 136992379 to 136996923 4544 + protein coding gene zinc finger, CCHC domain containing 18
Cpgi22956 X 136992844 to 136993032 188 CpG island CpG island 22956
Tssr164206 X 136993027 to 136993058 31 - TSS region transcription start site region 164206
Tssr162107 X 136993147 to 136993216 69 + TSS region transcription start site region 162107
Tssr162108 X 136993222 to 136993244 22 + TSS region transcription start site region 162108
Tssr162109 X 136993253 to 136993272 19 + TSS region transcription start site region 162109
Tssr162110 X 136993281 to 136993308 27 + TSS region transcription start site region 162110
Tssr162111 X 136993323 to 136993330 7 + TSS region transcription start site region 162111
Gm15038 X 136998042 to 136998337 295 + pseudogene predicted gene 15038
Cpgi22957 X 137037994 to 137038442 448 CpG island CpG island 22957
Tssr162112 X 137038114 to 137038127 13 + TSS region transcription start site region 162112
Tssr164207 X 137038265 to 137038309 44 - TSS region transcription start site region 164207
Cpgi22958 X 137049295 to 137050060 765 CpG island CpG island 22958
Tssr162113 X 137049586 to 137049654 68 + TSS region transcription start site region 162113
Fam199x X 137049594 to 137082503 32909 + protein coding gene family with sequence similarity 199, X-linked
Gm25770 X 137093612 to 137093726 114 - snoRNA gene predicted gene, 25770
Gm8019 X 137099519 to 137100099 580 + pseudogene predicted gene 8019
Gm5761 X 137103889 to 137104722 833 - pseudogene predicted gene 5761
Gm15039 X 137107246 to 137108120 874 + pseudogene predicted gene 15039
Gm15042 X 137108605 to 137109487 882 + pseudogene predicted gene 15042
Gm15045 X 137109973 to 137110855 882 + pseudogene predicted gene 15045
Gm15043 X 137111340 to 137112882 1542 + pseudogene predicted gene 15043
Gm15044 X 137113527 to 137114106 579 + pseudogene predicted gene 15044
Esx1 X 137115397 to 137122083 6686 - protein coding gene extraembryonic, spermatogenesis, homeobox 1
Tssr164208 X 137117275 to 137117306 31 - TSS region transcription start site region 164208
Cpgi22959 X 137118239 to 137120407 2168 CpG island CpG island 22959
Tssr164209 X 137119706 to 137119714 8 - TSS region transcription start site region 164209
Tssr164210 X 137119805 to 137119819 14 - TSS region transcription start site region 164210
Tssr164211 X 137120128 to 137120133 5 - TSS region transcription start site region 164211
Tssr164212 X 137122135 to 137122171 36 - TSS region transcription start site region 164212
Gm15040 X 137128133 to 137129756 1623 + pseudogene predicted gene 15040
Gm15041 X 137130916 to 137131671 755 + pseudogene predicted gene 15041
Gm23679 X 137150815 to 137150933 118 + snoRNA gene predicted gene, 23679
Gm8036 X 137203486 to 137206528 3042 - pseudogene predicted gene 8036
Tssr162114 X 137358694 to 137358705 11 + TSS region transcription start site region 162114
Tssr162115 X 137358729 to 137358738 9 + TSS region transcription start site region 162115
Tssr162116 X 137374643 to 137374653 10 + TSS region transcription start site region 162116
Tssr5682 X 137537615 to 137537618 3 - TSS region transcription start site region 5682
Il1rapl2 X 137570608 to 138846946 1276338 + protein coding gene interleukin 1 receptor accessory protein-like 2
Cpgi22960 X 137570715 to 137571267 552 CpG island CpG island 22960
Tssr162117 X 137570780 to 137570784 4 + TSS region transcription start site region 162117
Tssr5683 X 137599534 to 137599537 3 + TSS region transcription start site region 5683
Gm14988 X 137638882 to 137642316 3434 - pseudogene predicted gene 14988
Tssr162118 X 137671390 to 137671393 3 + TSS region transcription start site region 162118
DXMit37 X 137684873 to 137685012 139 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 37
Tssr162119 X 137709006 to 137709009 3 + TSS region transcription start site region 162119
Gm25393 X 137815156 to 137815440 284 - unclassified non-coding RNA gene predicted gene, 25393
Tssr164213 X 137950495 to 137950500 5 - TSS region transcription start site region 164213
Gm14989 X 138085607 to 138085813 206 - pseudogene predicted gene 14989
Gm24675 X 138145382 to 138145640 258 - unclassified non-coding RNA gene predicted gene, 24675
Tex13a X 138208165 to 138209580 1415 - protein coding gene testis expressed 13A
Gm22057 X 138303307 to 138303413 106 - snRNA gene predicted gene, 22057
DXMit66 X 138341319 to 138341467 148 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 66
Gm23958 X 138422715 to 138422819 104 - snRNA gene predicted gene, 23958
Gm15000 X 138522506 to 138523748 1242 - pseudogene predicted gene 15000