Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:133976852-134246873

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sytl4 X 133936385 to 133981812 45427 - protein coding gene synaptotagmin-like 4
Tssr164128 X 133981707 to 133981719 12 - TSS region transcription start site region 164128
Tssr164129 X 133981722 to 133981754 32 - TSS region transcription start site region 164129
Tssr164130 X 133981765 to 133981812 47 - TSS region transcription start site region 164130
Gm7841 X 134053615 to 134054473 858 - pseudogene predicted gene 7841
Cpgi22936 X 134058982 to 134059876 894 CpG island CpG island 22936
Tssr161985 X 134059108 to 134059112 4 + TSS region transcription start site region 161985
Tssr161986 X 134059137 to 134059213 76 + TSS region transcription start site region 161986
Cstf2 X 134059187 to 134086819 27632 + protein coding gene cleavage stimulation factor, 3' pre-RNA subunit 2
Tssr161987 X 134059261 to 134059272 11 + TSS region transcription start site region 161987
Tssr161988 X 134059315 to 134059366 51 + TSS region transcription start site region 161988
Mir3112 X 134075316 to 134075397 81 + miRNA gene microRNA 3112
9330119M13Rik X 134076787 to 134079680 2893 unclassified non-coding RNA gene RIKEN cDNA 9330119M13 gene
Nox1 X 134086421 to 134137711 51290 - protein coding gene NADPH oxidase 1
Tssr164131 X 134111766 to 134111788 22 - TSS region transcription start site region 164131
Tssr164132 X 134111806 to 134111814 8 - TSS region transcription start site region 164132
Tssr164133 X 134111826 to 134111836 10 - TSS region transcription start site region 164133
Tssr164134 X 134111852 to 134111873 21 - TSS region transcription start site region 164134
Xkrx X 134149043 to 134162076 13033 - protein coding gene X-linked Kx blood group related, X-linked
Tssr164135 X 134162476 to 134162495 19 - TSS region transcription start site region 164135
Tssr164136 X 134162505 to 134162512 7 - TSS region transcription start site region 164136
Tssr164137 X 134162948 to 134162966 18 - TSS region transcription start site region 164137
Tssr164138 X 134162977 to 134162998 21 - TSS region transcription start site region 164138
Tssr161989 X 134187492 to 134187503 11 + TSS region transcription start site region 161989
Arl13a X 134187501 to 134208028 20527 + protein coding gene ADP-ribosylation factor-like 13A
Tssr161990 X 134187505 to 134187513 8 + TSS region transcription start site region 161990
Trmt2b X 134222955 to 134277026 54071 - protein coding gene TRM2 tRNA methyltransferase 2B