Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:10270773-10701050

Filter by:
27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Otc X 10252305 to 10321024 68719 + protein coding gene ornithine transcarbamylase
Tssr160534 X 10276645 to 10276661 16 + TSS region transcription start site region 160534
Tssr160535 X 10312474 to 10312493 19 + TSS region transcription start site region 160535
Tssr160536 X 10319841 to 10319873 32 + TSS region transcription start site region 160536
DXMit89 X 10399986 to 10400132 146 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 89
Spha1 X 10399986 to 40832775 30432789 QTL sperm head anomaly 1
4933416E14Rik X 10415301 to 10417238 1937 - pseudogene RIKEN cDNA 4933416E14 gene
Tssr160537 X 10416640 to 10416662 22 + TSS region transcription start site region 160537
Tssr160538 X 10416675 to 10416682 7 + TSS region transcription start site region 160538
Cpgi22601 X 10484853 to 10485422 569 CpG island CpG island 22601
Tssr160539 X 10485121 to 10485163 42 + TSS region transcription start site region 160539
Tspan7 X 10485158 to 10596605 111447 + protein coding gene tetraspanin 7
Cpgi22602 X 10485773 to 10486050 277 CpG island CpG island 22602
Tssr160540 X 10487823 to 10487831 8 + TSS region transcription start site region 160540
Gm25885 X 10510048 to 10510156 108 + rRNA gene predicted gene, 25885
Tssr160541 X 10518624 to 10518627 3 + TSS region transcription start site region 160541
Tssr160542 X 10582134 to 10582137 3 + TSS region transcription start site region 160542
Tssr160543 X 10582145 to 10582154 9 + TSS region transcription start site region 160543
Tssr160544 X 10585549 to 10585572 23 + TSS region transcription start site region 160544
Tssr160545 X 10595702 to 10595787 85 + TSS region transcription start site region 160545
Tssr162980 X 10595718 to 10595752 34 - TSS region transcription start site region 162980
Tssr160546 X 10596004 to 10596030 26 + TSS region transcription start site region 160546
Cpgi22603 X 10650550 to 10650726 176 CpG island CpG island 22603
Gm5931 X 10660522 to 10660998 476 + pseudogene predicted pseudogene 5931
Gm14470 X 10680964 to 10681429 465 + pseudogene predicted gene 14470
Gm14480 X 10696932 to 10697364 432 - pseudogene predicted gene 14480
Tssr5591 X 10697431 to 10697434 3 - TSS region transcription start site region 5591