MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:98501642-98701677

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rbp2	9	98490537 to 98509771	19234	+	protein coding gene	retinol binding protein 2, cellular
Tssr86658	9	98504754 to 98504766	12	+	TSS region	transcription start site region 86658
Tssr2985	9	98504945 to 98504956	11	+	TSS region	transcription start site region 2985
Tssr86659	9	98509663 to 98509683	20	+	TSS region	transcription start site region 86659
Tssr86660	9	98509727 to 98509738	11	+	TSS region	transcription start site region 86660
Tssr86661	9	98515519 to 98515526	7	+	TSS region	transcription start site region 86661
4930579K19Rik	9	98562460 to 98563611	1151	-	lncRNA gene	RIKEN cDNA 4930579K19 gene
Cpgi22179	9	98563177 to 98564170	993		CpG island	CpG island 22179
Tssr91030	9	98563580 to 98563620	40	-	TSS region	transcription start site region 91030
Tssr86662	9	98563696 to 98563698	2	+	TSS region	transcription start site region 86662
Tssr86663	9	98563704 to 98563737	33	+	TSS region	transcription start site region 86663
Copb2	9	98563731 to 98588375	24644	+	protein coding gene	coatomer protein complex, subunit beta 2 (beta prime)
Tssr86664	9	98563742 to 98563775	33	+	TSS region	transcription start site region 86664
Gm47147	9	98575308 to 98576766	1458	-	pseudogene	predicted gene, 47147
Mrps22	9	98588730 to 98601660	12930	-	protein coding gene	mitochondrial ribosomal protein S22
Gm37637	9	98590495 to 98591750	1255	+	antisense lncRNA gene	predicted gene, 37637
Cpgi22180	9	98601252 to 98601818	566		CpG island	CpG island 22180
Tssr91031	9	98601642 to 98601677	35	-	TSS region	transcription start site region 91031