Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:96396001-96615264

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39409 9 96378116 to 96396813 18697 - lncRNA gene predicted gene, 39409
Gm40550 9 96385390 to 96399984 14594 + lncRNA gene predicted gene, 40550
D9Dcr27 9 96397773 to 96397886 113 DNA segment DNA segment, Chr 9, Derry C. Roopenian 27
D9Mit274 9 96397810 to 96397888 78 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 274
Bglu14 9 96397810 to 96397888 78 QTL blood glucose level 14
BC043934 9 96435783 to 96438138 2355 - lincRNA gene cDNA sequence BC043934
Cpgi22163 9 96437028 to 96437226 198 CpG island CpG island 22163
Cpgi22164 9 96437503 to 96438219 716 CpG island CpG island 22164
Tssr90963 9 96438161 to 96438226 65 - TSS region transcription start site region 90963
Rnf7 9 96470937 to 96478675 7738 - protein coding gene ring finger protein 7
Cpgi22165 9 96478040 to 96478882 842 CpG island CpG island 22165
Tssr86604 9 96478345 to 96478361 16 + TSS region transcription start site region 86604
Tssr90964 9 96478596 to 96478622 26 - TSS region transcription start site region 90964
Tssr90965 9 96478631 to 96478647 16 - TSS region transcription start site region 90965
Tssr90966 9 96478660 to 96478669 9 - TSS region transcription start site region 90966
Tssr86605 9 96478779 to 96478806 27 + TSS region transcription start site region 86605
Tssr90967 9 96479527 to 96479536 9 - TSS region transcription start site region 90967
Gm28729 9 96486001 to 96525264 39263 - protein coding gene predicted gene 28729
Gm27289 9 96495132 to 96495213 81 - rRNA gene predicted gene, 27289
Tssr90968 9 96525245 to 96525257 12 - TSS region transcription start site region 90968
Tssr90969 9 96525259 to 96525284 25 - TSS region transcription start site region 90969
Tssr86606 9 96525303 to 96525324 21 + TSS region transcription start site region 86606
Tssr86607 9 96525327 to 96525362 35 + TSS region transcription start site region 86607
Tssr90970 9 96525406 to 96525415 9 - TSS region transcription start site region 90970
Tssr86608 9 96525564 to 96525573 9 + TSS region transcription start site region 86608
Gm46125 9 96525569 to 96606085 80516 + lncRNA gene predicted gene, 46125
Cpgi22166 9 96536881 to 96537228 347 CpG island CpG island 22166
Gm8495 9 96537187 to 96537856 669 + pseudogene predicted gene 8495
Tssr86609 9 96537269 to 96537296 27 + TSS region transcription start site region 86609
Rasa2 9 96539300 to 96631617 92317 - protein coding gene RAS p21 protein activator 2
Tssr90971 9 96539884 to 96539888 4 - TSS region transcription start site region 90971
n-R5s87 9 96549594 to 96549709 115 - rRNA gene nuclear encoded rRNA 5S 87
Gm19280 9 96584303 to 96584507 204 + pseudogene predicted gene, 19280
Tssr90972 9 96611411 to 96611424 13 - TSS region transcription start site region 90972