MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:95802881-95912895

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pls1	9	95752642 to 95845306	92664	-	protein coding gene	plastin 1 (I-isoform)
Tssr2974	9	95805433 to 95805436	3	-	TSS region	transcription start site region 2974
Tssr90935	9	95815296 to 95815307	11	-	TSS region	transcription start site region 90935
Tssr90936	9	95815343 to 95815374	31	-	TSS region	transcription start site region 90936
Tssr90937	9	95815389 to 95815398	9	-	TSS region	transcription start site region 90937
Tssr86576	9	95815522 to 95815528	6	+	TSS region	transcription start site region 86576
Tssr90938	9	95819410 to 95819413	3	-	TSS region	transcription start site region 90938
Cpgi22157	9	95844888 to 95845536	648		CpG island	CpG island 22157
Tssr90939	9	95845215 to 95845285	70	-	TSS region	transcription start site region 90939
1700065D16Rik	9	95855418 to 95857882	2464	-	antisense lncRNA gene	RIKEN cDNA 1700065D16 gene
Cpgi22158	9	95857380 to 95858504	1124		CpG island	CpG island 22158
Tssr90940	9	95857559 to 95857570	11	-	TSS region	transcription start site region 90940
Atr	9	95857597 to 95951781	94184	+	protein coding gene	ataxia telangiectasia and Rad3 related
Tssr86577	9	95857628 to 95857686	58	+	TSS region	transcription start site region 86577
Tssr86578	9	95857694 to 95857710	16	+	TSS region	transcription start site region 86578
Tssr90941	9	95857864 to 95857876	12	-	TSS region	transcription start site region 90941
Tssr90942	9	95857881 to 95857895	14	-	TSS region	transcription start site region 90942
Tssr86579	9	95857944 to 95857951	7	+	TSS region	transcription start site region 86579