Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:95616908-95798689

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Psl6 9 65133909 to 95640755 30506846 QTL promotion susceptibility QTL 6
Gm16126 9 95618911 to 95648471 29560 - antisense lncRNA gene predicted gene 16126
Gm28164 9 95621978 to 95622419 441 - pseudogene predicted gene 28164
Gm25582 9 95624502 to 95624611 109 + snoRNA gene predicted gene, 25582
Gm16127 9 95636972 to 95638265 1293 - unclassified non-coding RNA gene predicted gene 16127
Cpgi22154 9 95637335 to 95638256 921 CpG island CpG island 22154
Tssr86572 9 95637412 to 95637424 12 + TSS region transcription start site region 86572
Tssr86573 9 95637623 to 95637632 9 + TSS region transcription start site region 86573
Pcolce2 9 95637628 to 95695551 57923 + protein coding gene procollagen C-endopeptidase enhancer 2
Tssr86574 9 95637652 to 95637656 4 + TSS region transcription start site region 86574
Tssr86575 9 95637731 to 95637746 15 + TSS region transcription start site region 86575
D9Mit76 9 95640645 to 95640755 110 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 76
Skts6 9 95640645 to 95640755 110 QTL skin tumor susceptibility 6
Cpgi22155 9 95670022 to 95670351 329 CpG island CpG island 22155
Itpa-ps2 9 95675429 to 95676017 588 - pseudogene inosine triphosphatase (nucleoside triphosphate pyrophosphatase) pseudogene 2
Trpc1 9 95705082 to 95750375 45293 - protein coding gene transient receptor potential cation channel, subfamily C, member 1
Gm39407 9 95706908 to 95708689 1781 + lncRNA gene predicted gene, 39407
Cpgi22156 9 95749412 to 95750584 1172 CpG island CpG island 22156
Tssr90926 9 95750295 to 95750333 38 - TSS region transcription start site region 90926
Tssr90927 9 95750335 to 95750368 33 - TSS region transcription start site region 90927
Pls1 9 95752642 to 95845306 92664 - protein coding gene plastin 1 (I-isoform)
Tssr90928 9 95753874 to 95753885 11 - TSS region transcription start site region 90928
Tssr90929 9 95753922 to 95753930 8 - TSS region transcription start site region 90929
Tssr90930 9 95754115 to 95754129 14 - TSS region transcription start site region 90930
Tssr90931 9 95785529 to 95785536 7 - TSS region transcription start site region 90931
Tssr90932 9 95795882 to 95795886 4 - TSS region transcription start site region 90932
Tssr90933 9 95795947 to 95795961 14 - TSS region transcription start site region 90933
Tssr90934 9 95795974 to 95795988 14 - TSS region transcription start site region 90934