Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:92560936-94511130

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plod2 9 92542223 to 92608428 66205 + protein coding gene procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
Tssr86522 9 92608163 to 92608176 13 + TSS region transcription start site region 86522
Gm2495 9 92612512 to 92612977 465 - pseudogene predicted gene 2495
Tssr86523 9 92691915 to 92691919 4 + TSS region transcription start site region 86523
Gm29396 9 92691943 to 92692756 813 + pseudogene predicted gene 29396
D9Mit320 9 92709098 to 92709244 146 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-320
4933400C23Rik 9 92718716 to 92795711 76995 + lincRNA gene RIKEN cDNA 4933400C23 gene
D9Mit238 9 92876480 to 92876624 144 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 238
Gm28054 9 92895832 to 92915791 19959 + lincRNA gene predicted gene 28054
Tssr2973 9 92942347 to 92942348 1 + TSS region transcription start site region 2973
Gm29397 9 92976226 to 92976558 332 + pseudogene predicted gene 29397
1700034K08Rik 9 92979916 to 93005733 25817 - lincRNA gene RIKEN cDNA 1700034K08 gene
Tssr90890 9 93005726 to 93005761 35 - TSS region transcription start site region 90890
Gm18841 9 93086288 to 93087128 840 - pseudogene predicted gene, 18841
Gm9621 9 93391368 to 93392370 1002 - pseudogene predicted gene 9621
D9Mit197 9 93392985 to 93393088 103 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 197
D9Mit239 9 93535936 to 93536130 194 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 239
Rapop2 9 93535936 to 93536130 194 QTL radiation-induced apoptosis 2
Gm47165 9 93569574 to 93570684 1110 + pseudogene predicted gene, 47165
Tssr86524 9 93853897 to 93853898 1 + TSS region transcription start site region 86524
Gm39401 9 93970748 to 93980149 9401 - lncRNA gene predicted gene, 39401
Gm31847 9 93980270 to 94190340 210070 - lncRNA gene predicted gene, 31847
Gm39403 9 94108183 to 94118886 10703 + lncRNA gene predicted gene, 39403
Gm5369 9 94139462 to 94140049 587 + pseudogene predicted gene 5369
Gm24200 9 94284496 to 94284652 156 + snRNA gene predicted gene, 24200
D9Mit344 9 94370094 to 94370218 124 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 344
Gm5370 9 94407553 to 94408126 573 - pseudogene predicted gene 5370
Gm28934 9 94416558 to 94416903 345 + pseudogene predicted gene 28934
D9Mit50 9 94440886 to 94441044 158 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 50
D9Dcr26 9 94440926 to 94441037 111 DNA segment DNA segment, Chr 9, Derry C. Roopenian 26
Gm46148 9 94471086 to 94473236 2150 - lncRNA gene predicted gene, 46148
Tssr86525 9 94473356 to 94473362 6 + TSS region transcription start site region 86525
Gm31957 9 94473374 to 94477684 4310 + lncRNA gene predicted gene, 31957