Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:92388801-92692869

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr90889 9 92436525 to 92436539 14 - TSS region transcription start site region 90889
Tssr86518 9 92457369 to 92457389 20 + TSS region transcription start site region 86518
Plscr4 9 92457373 to 92492456 35083 + protein coding gene phospholipid scramblase 4
Cpgi22146 9 92457603 to 92458266 663 CpG island CpG island 22146
Tssr86519 9 92457786 to 92457896 110 + TSS region transcription start site region 86519
D9Mit273 9 92477549 to 92477669 120 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 273
D9Mit273.2 9 92477668 to 92477801 133 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 273.2
Gm25417 9 92527578 to 92527708 130 - snoRNA gene predicted gene, 25417
D9Mit272 9 92532755 to 92532859 104 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 272
Gm38391 9 92538801 to 92542869 4068 - unclassified gene predicted gene, 38391
B430319G15Rik 9 92538801 to 92542869 4068 - lncRNA gene RIKEN cDNA B430319G15 gene
Gm37545 9 92539936 to 92540083 147 - pseudogene predicted gene, 37545
Cpgi22147 9 92541857 to 92542977 1120 CpG island CpG island 22147
Plod2 9 92542223 to 92608428 66205 + protein coding gene procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
Tssr86520 9 92542255 to 92542272 17 + TSS region transcription start site region 86520
Tssr86521 9 92542430 to 92542439 9 + TSS region transcription start site region 86521
Tssr86522 9 92608163 to 92608176 13 + TSS region transcription start site region 86522
Gm2495 9 92612512 to 92612977 465 - pseudogene predicted gene 2495
Tssr86523 9 92691915 to 92691919 4 + TSS region transcription start site region 86523
Gm29396 9 92691943 to 92692756 813 + pseudogene predicted gene 29396