Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:70003075-70203110

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bnip2 9 69989466 to 70008317 18851 + protein coding gene BCL2/adenovirus E1B interacting protein 2
Tssr85872 9 70007155 to 70007171 16 + TSS region transcription start site region 85872
Cpgi21997 9 70012346 to 70013004 658 CpG island CpG island 21997
Tssr85873 9 70012540 to 70012592 52 + TSS region transcription start site region 85873
Gtf2a2 9 70012550 to 70022866 10316 + protein coding gene general transcription factor II A, 2
Tssr85874 9 70012594 to 70012611 17 + TSS region transcription start site region 85874
Tssr85875 9 70020251 to 70020263 12 + TSS region transcription start site region 85875
Gcnt3 9 70031496 to 70038088 6592 - protein coding gene glucosaminyl (N-acetyl) transferase 3, mucin type
Tssr90380 9 70032444 to 70032448 4 - TSS region transcription start site region 90380
Tssr90381 9 70032634 to 70032637 3 - TSS region transcription start site region 90381
Tssr90382 9 70035556 to 70035574 18 - TSS region transcription start site region 90382
Tssr90383 9 70036681 to 70036704 23 - TSS region transcription start site region 90383
Tssr90384 9 70036705 to 70036711 6 - TSS region transcription start site region 90384
Tssr90385 9 70036728 to 70036739 11 - TSS region transcription start site region 90385
Tssr90386 9 70036795 to 70036802 7 - TSS region transcription start site region 90386
Tssr90387 9 70036810 to 70036817 7 - TSS region transcription start site region 90387
Tssr90388 9 70036818 to 70036841 23 - TSS region transcription start site region 90388
Tssr90389 9 70037951 to 70037960 9 - TSS region transcription start site region 90389
Tssr90390 9 70037993 to 70038018 25 - TSS region transcription start site region 90390
Tssr90391 9 70038043 to 70038052 9 - TSS region transcription start site region 90391
Tssr90392 9 70038054 to 70038057 3 - TSS region transcription start site region 90392
Tssr90393 9 70038075 to 70038093 18 - TSS region transcription start site region 90393
Tssr90394 9 70038096 to 70038109 13 - TSS region transcription start site region 90394
Tssr90395 9 70040680 to 70040715 35 - TSS region transcription start site region 90395
Tssr85876 9 70067918 to 70067933 15 + TSS region transcription start site region 85876
Tssr85877 9 70067946 to 70067955 9 + TSS region transcription start site region 85877
Gm47233 9 70069867 to 70072034 2167 + unclassified gene predicted gene, 47233
2210414F02Rik 9 70072923 to 70073443 520 + lincRNA gene RIKEN cDNA 2210414F02 gene
Gm39369 9 70079791 to 70083046 3255 - lncRNA gene predicted gene, 39369
Fam81a 9 70088511 to 70142555 54044 - protein coding gene family with sequence similarity 81, member A
Tssr90396 9 70090252 to 70090258 6 - TSS region transcription start site region 90396
Tssr90397 9 70103075 to 70103110 35 - TSS region transcription start site region 90397
Tssr90398 9 70103117 to 70103142 25 - TSS region transcription start site region 90398
Cpgi21998 9 70140918 to 70142094 1176 CpG island CpG island 21998
Tssr90399 9 70141356 to 70141482 126 - TSS region transcription start site region 90399
Tssr90400 9 70141484 to 70141559 75 - TSS region transcription start site region 90400
Tssr90401 9 70142172 to 70142183 11 - TSS region transcription start site region 90401
Gm24257 9 70148806 to 70148936 130 - snoRNA gene predicted gene, 24257
Gm39476 9 70149687 to 70160267 10580 - lncRNA gene predicted gene, 39476
Gm26849 9 70169986 to 70197548 27562 - lincRNA gene predicted gene, 26849
Tssr90402 9 70197470 to 70197478 8 - TSS region transcription start site region 90402