Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:66675202-66895490

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21970 9 66713670 to 66713940 270 CpG island CpG island 21970
Car12 9 66713686 to 66766845 53159 + protein coding gene carbonic anhydrase 12
Tssr85768 9 66713709 to 66713716 7 + TSS region transcription start site region 85768
Tssr85769 9 66713719 to 66713736 17 + TSS region transcription start site region 85769
D9Mit303 9 66721748 to 66721871 123 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 303
Tssr85770 9 66754400 to 66754406 6 + TSS region transcription start site region 85770
Aph1b 9 66775202 to 66795490 20288 - protein coding gene aph1 homolog B, gamma secretase subunit
Tssr90265 9 66782279 to 66782283 4 - TSS region transcription start site region 90265
Cpgi21971 9 66795027 to 66796076 1049 CpG island CpG island 21971
Tssr90266 9 66795298 to 66795319 21 - TSS region transcription start site region 90266
Tssr90267 9 66795331 to 66795411 80 - TSS region transcription start site region 90267
Tssr90268 9 66795469 to 66795521 52 - TSS region transcription start site region 90268
Gm10647 9 66797039 to 66799074 2035 + protein coding gene predicted gene 10647
BC050972 9 66798678 to 66804359 5681 - antisense lncRNA gene cDNA sequence BC050972
Tssr90269 9 66804326 to 66804341 15 - TSS region transcription start site region 90269
Tssr90270 9 66804342 to 66804357 15 - TSS region transcription start site region 90270
Ppp1r2-ps4 9 66805306 to 66805938 632 - pseudogene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 4
Cpgi21972 9 66806062 to 66806295 233 CpG island CpG island 21972
Aph1c 9 66814994 to 66834726 19732 - protein coding gene aph1 homolog C, gamma secretase subunit
Cpgi21973 9 66834197 to 66835516 1319 CpG island CpG island 21973
Tssr90271 9 66834622 to 66834634 12 - TSS region transcription start site region 90271
Tssr90272 9 66834659 to 66834677 18 - TSS region transcription start site region 90272
Gm17098 9 66834699 to 66835534 835 + antisense lncRNA gene predicted gene 17098
Tssr90273 9 66834707 to 66834710 3 - TSS region transcription start site region 90273
Tssr90274 9 66834716 to 66834724 8 - TSS region transcription start site region 90274
Rab8b 9 66843664 to 66919687 76023 - protein coding gene RAB8B, member RAS oncogene family
Tssr90275 9 66844370 to 66844381 11 - TSS region transcription start site region 90275
Tssr90276 9 66845318 to 66845327 9 - TSS region transcription start site region 90276
Tssr90277 9 66845538 to 66845552 14 - TSS region transcription start site region 90277
Tssr90278 9 66845627 to 66845642 15 - TSS region transcription start site region 90278
Tssr90279 9 66845661 to 66845681 20 - TSS region transcription start site region 90279
Tssr90280 9 66845690 to 66845704 14 - TSS region transcription start site region 90280
Tssr90281 9 66845752 to 66845841 89 - TSS region transcription start site region 90281
Tssr90282 9 66845843 to 66845884 41 - TSS region transcription start site region 90282
Tssr90283 9 66846277 to 66846299 22 - TSS region transcription start site region 90283
Tssr90284 9 66846360 to 66846383 23 - TSS region transcription start site region 90284
Tssr90285 9 66847595 to 66847621 26 - TSS region transcription start site region 90285
Tssr90286 9 66847625 to 66847643 18 - TSS region transcription start site region 90286
Tssr90287 9 66847667 to 66847682 15 - TSS region transcription start site region 90287
Gm40528 9 66872060 to 66883930 11870 + lncRNA gene predicted gene, 40528
Tssr85771 9 66872559 to 66872594 35 + TSS region transcription start site region 85771
Tssr90288 9 66879061 to 66879072 11 - TSS region transcription start site region 90288
Tssr90289 9 66881546 to 66881548 2 - TSS region transcription start site region 90289
Tssr90290 9 66882456 to 66882466 10 - TSS region transcription start site region 90290