Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:66444567-66584597

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Herc1 9 66350450 to 66508775 158325 + protein coding gene HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
Gm28379 9 66417746 to 66448496 30750 - antisense lncRNA gene predicted gene 28379
Tssr85762 9 66445627 to 66445639 12 + TSS region transcription start site region 85762
Tssr85763 9 66448046 to 66448069 23 + TSS region transcription start site region 85763
Tssr85764 9 66468619 to 66468623 4 + TSS region transcription start site region 85764
Fbxl22 9 66508459 to 66514593 6134 - protein coding gene F-box and leucine-rich repeat protein 22
Cpgi21968 9 66511162 to 66512661 1499 CpG island CpG island 21968
Tssr90241 9 66511725 to 66511774 49 - TSS region transcription start site region 90241
Tssr90242 9 66512453 to 66512488 35 - TSS region transcription start site region 90242
Tssr85765 9 66512605 to 66512632 27 + TSS region transcription start site region 85765
Tssr90243 9 66514500 to 66514526 26 - TSS region transcription start site region 90243
Tssr90244 9 66514533 to 66514536 3 - TSS region transcription start site region 90244
Tssr90245 9 66514540 to 66514563 23 - TSS region transcription start site region 90245
Tssr90246 9 66514567 to 66514597 30 - TSS region transcription start site region 90246
Usp3 9 66514639 to 66593115 78476 - protein coding gene ubiquitin specific peptidase 3
Tssr90247 9 66518598 to 66518602 4 - TSS region transcription start site region 90247
Tssr90248 9 66518644 to 66518653 9 - TSS region transcription start site region 90248
Tssr90249 9 66520310 to 66520342 32 - TSS region transcription start site region 90249
Tssr90250 9 66520383 to 66520414 31 - TSS region transcription start site region 90250
Gm15563 9 66572001 to 66582059 10058 + antisense lncRNA gene predicted gene 15563
Tssr90251 9 66576028 to 66576048 20 - TSS region transcription start site region 90251
Tssr90252 9 66580315 to 66580321 6 - TSS region transcription start site region 90252
Tssr90253 9 66580692 to 66580700 8 - TSS region transcription start site region 90253
Tssr90254 9 66583182 to 66583184 2 - TSS region transcription start site region 90254