Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:65617391-65902564

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21955 9 65629106 to 65631573 2467 CpG island CpG island 21955
Tssr90214 9 65629452 to 65629496 44 - TSS region transcription start site region 90214
Tssr85716 9 65629610 to 65629683 73 + TSS region transcription start site region 85716
Rbpms2 9 65629648 to 65660528 30880 + protein coding gene RNA binding protein with multiple splicing 2
Tssr90215 9 65629894 to 65629898 4 - TSS region transcription start site region 90215
Tssr85717 9 65630552 to 65630599 47 + TSS region transcription start site region 85717
Tssr85718 9 65630604 to 65630617 13 + TSS region transcription start site region 85718
Tssr85719 9 65630687 to 65630703 16 + TSS region transcription start site region 85719
Tssr85720 9 65630729 to 65630736 7 + TSS region transcription start site region 85720
Tssr85721 9 65630754 to 65630761 7 + TSS region transcription start site region 85721
Tssr85722 9 65630810 to 65630820 10 + TSS region transcription start site region 85722
Tssr85723 9 65631070 to 65631088 18 + TSS region transcription start site region 85723
Tssr85724 9 65637839 to 65637852 13 + TSS region transcription start site region 85724
Tssr85725 9 65659656 to 65659678 22 + TSS region transcription start site region 85725
Cpgi21956 9 65676426 to 65676876 450 CpG island CpG island 21956
Tssr85726 9 65676517 to 65676556 39 + TSS region transcription start site region 85726
Oaz2 9 65676548 to 65690300 13752 + protein coding gene ornithine decarboxylase antizyme 2
Tssr85727 9 65676566 to 65676621 55 + TSS region transcription start site region 85727
Tssr90216 9 65691393 to 65691397 4 - TSS region transcription start site region 90216
Zfp609 9 65692391 to 65827564 135173 - protein coding gene zinc finger protein 609
Tssr2918 9 65700393 to 65700401 8 + TSS region transcription start site region 2918
Gm30089 9 65739379 to 65739752 373 - pseudogene predicted gene, 30089
Tssr90217 9 65765002 to 65765005 3 - TSS region transcription start site region 90217
Tssr90218 9 65771447 to 65771450 3 - TSS region transcription start site region 90218
Cpgi21957 9 65826968 to 65828211 1243 CpG island CpG island 21957
Tssr90219 9 65827544 to 65827576 32 - TSS region transcription start site region 90219
Tssr90220 9 65827667 to 65827696 29 - TSS region transcription start site region 90220
Tssr90221 9 65827707 to 65827740 33 - TSS region transcription start site region 90221
Trip4 9 65828930 to 65908794 79864 - protein coding gene thyroid hormone receptor interactor 4
Gm30314 9 65832116 to 65841198 9082 + lncRNA gene predicted gene, 30314
n-R5s85 9 65836353 to 65836465 112 + rRNA gene nuclear encoded rRNA 5S 85
Gm16073 9 65838167 to 65838683 516 + pseudogene predicted gene 16073
Cpgi21958 9 65884860 to 65885289 429 CpG island CpG island 21958
Tssr90222 9 65885024 to 65885069 45 - TSS region transcription start site region 90222
Tssr90223 9 65885076 to 65885091 15 - TSS region transcription start site region 90223
Tssr90224 9 65885106 to 65885117 11 - TSS region transcription start site region 90224
Cpgi21959 9 65890177 to 65890358 181 CpG island CpG island 21959
Pclaf 9 65890237 to 65903266 13029 + protein coding gene PCNA clamp associated factor
Tssr85728 9 65890291 to 65890343 52 + TSS region transcription start site region 85728
Tssr85729 9 65890344 to 65890358 14 + TSS region transcription start site region 85729
Tssr85730 9 65890524 to 65890538 14 + TSS region transcription start site region 85730
D030028M11Rik 9 65895921 to 65898262 2341 unclassified gene RIKEN cDNA D030028M11 gene
Tssr85731 9 65896433 to 65896468 35 + TSS region transcription start site region 85731
Gm23248 9 65900201 to 65900308 107 + snRNA gene predicted gene, 23248