Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:65562839-65712852

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plekho2 9 65552698 to 65580040 27342 - protein coding gene pleckstrin homology domain containing, family O member 2
Tssr90208 9 65567703 to 65567734 31 - TSS region transcription start site region 90208
Tssr90209 9 65571791 to 65571823 32 - TSS region transcription start site region 90209
Tssr90210 9 65573007 to 65573054 47 - TSS region transcription start site region 90210
Tssr90211 9 65574689 to 65574705 16 - TSS region transcription start site region 90211
D9Dcr2 9 65577857 to 65577972 115 DNA segment DNA segment, Chr 9, Derry C. Roopenian 2
D9Mit336 9 65577864 to 65577985 121 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 336
Tssr85713 9 65579220 to 65579231 11 + TSS region transcription start site region 85713
Cpgi21951 9 65579476 to 65580414 938 CpG island CpG island 21951
Tssr90212 9 65580043 to 65580061 18 - TSS region transcription start site region 90212
Tssr90213 9 65580081 to 65580086 5 - TSS region transcription start site region 90213
Cpgi21952 9 65580496 to 65580762 266 CpG island CpG island 21952
Cpgi21953 9 65586866 to 65587073 207 CpG island CpG island 21953
Tssr85714 9 65587149 to 65587185 36 + TSS region transcription start site region 85714
Pif1 9 65587160 to 65595967 8807 + protein coding gene PIF1 5'-to-3' DNA helicase
Tssr85715 9 65587187 to 65587221 34 + TSS region transcription start site region 85715
Cpgi21954 9 65587613 to 65588502 889 CpG island CpG island 21954
Gm10144 9 65599914 to 65600981 1067 - pseudogene predicted pseudogene 10144
Cpgi21955 9 65629106 to 65631573 2467 CpG island CpG island 21955
Tssr90214 9 65629452 to 65629496 44 - TSS region transcription start site region 90214
Tssr85716 9 65629610 to 65629683 73 + TSS region transcription start site region 85716
Rbpms2 9 65629648 to 65660528 30880 + protein coding gene RNA binding protein with multiple splicing 2
Tssr90215 9 65629894 to 65629898 4 - TSS region transcription start site region 90215
Tssr85717 9 65630552 to 65630599 47 + TSS region transcription start site region 85717
Tssr85718 9 65630604 to 65630617 13 + TSS region transcription start site region 85718
Tssr85719 9 65630687 to 65630703 16 + TSS region transcription start site region 85719
Tssr85720 9 65630729 to 65630736 7 + TSS region transcription start site region 85720
Tssr85721 9 65630754 to 65630761 7 + TSS region transcription start site region 85721
Tssr85722 9 65630810 to 65630820 10 + TSS region transcription start site region 85722
Tssr85723 9 65631070 to 65631088 18 + TSS region transcription start site region 85723
Tssr85724 9 65637839 to 65637852 13 + TSS region transcription start site region 85724
Tssr85725 9 65659656 to 65659678 22 + TSS region transcription start site region 85725
Cpgi21956 9 65676426 to 65676876 450 CpG island CpG island 21956
Tssr85726 9 65676517 to 65676556 39 + TSS region transcription start site region 85726
Oaz2 9 65676548 to 65690300 13752 + protein coding gene ornithine decarboxylase antizyme 2
Tssr85727 9 65676566 to 65676621 55 + TSS region transcription start site region 85727
Tssr90216 9 65691393 to 65691397 4 - TSS region transcription start site region 90216
Zfp609 9 65692391 to 65827564 135173 - protein coding gene zinc finger protein 609
Tssr2918 9 65700393 to 65700401 8 + TSS region transcription start site region 2918