MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:65341041-65400377

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39363	9	65332520 to 65345607	13087	+	lincRNA gene	predicted gene, 39363
Gm47192	9	65341988 to 65342174	186	-	pseudogene	predicted gene, 47192
Cpgi21944	9	65345874 to 65347181	1307		CpG island	CpG island 21944
Tssr85690	9	65346066 to 65346077	11	+	TSS region	transcription start site region 85690
Tssr85691	9	65346091 to 65346129	38	+	TSS region	transcription start site region 85691
Pdcd7	9	65346104 to 65359643	13539	+	protein coding gene	programmed cell death 7
Tssr85692	9	65361023 to 65361047	24	+	TSS region	transcription start site region 85692
Ubap1l	9	65361041 to 65380377	19336	+	protein coding gene	ubiquitin-associated protein 1-like
Tssr85693	9	65361049 to 65361056	7	+	TSS region	transcription start site region 85693
Gm17875	9	65364889 to 65365495	606	+	pseudogene	predicted gene, 17875
Tssr85694	9	65371673 to 65371686	13	+	TSS region	transcription start site region 85694
Tssr85695	9	65371695 to 65371708	13	+	TSS region	transcription start site region 85695
Cpgi21945	9	65371774 to 65372186	412		CpG island	CpG island 21945
Kbtbd13	9	65388684 to 65391652	2968	-	protein coding gene	kelch repeat and BTB (POZ) domain containing 13
Cpgi21946	9	65390419 to 65391919	1500		CpG island	CpG island 21946
Cpgi21947	9	65398245 to 65398754	509		CpG island	CpG island 21947
Tssr90173	9	65398395 to 65398400	5	-	TSS region	transcription start site region 90173
Rasl12	9	65398506 to 65414853	16347	+	protein coding gene	RAS-like, family 12
Tssr85696	9	65398507 to 65398580	73	+	TSS region	transcription start site region 85696