MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:65235673-65295693

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Parp16	9	65214379 to 65239220	24841	+	protein coding gene	poly (ADP-ribose) polymerase family, member 16
Gm36538	9	65233847 to 65265616	31769	-	lncRNA gene	predicted gene, 36538
Tssr85676	9	65235879 to 65235884	5	+	TSS region	transcription start site region 85676
Tssr2915	9	65262809 to 65262811	2	+	TSS region	transcription start site region 2915
Tssr85677	9	65265173 to 65265187	14	+	TSS region	transcription start site region 85677
Cilp	9	65265180 to 65280605	15425	+	protein coding gene	cartilage intermediate layer protein, nucleotide pyrophosphohydrolase
Tssr85678	9	65265673 to 65265693	20	+	TSS region	transcription start site region 85678
Cpgi21943	9	65293995 to 65295058	1063		CpG island	CpG island 21943
Tssr85679	9	65294157 to 65294169	12	+	TSS region	transcription start site region 85679
Tssr85680	9	65294179 to 65294204	25	+	TSS region	transcription start site region 85680
Clpx	9	65294260 to 65330658	36398	+	protein coding gene	caseinolytic mitochondrial matrix peptidase chaperone subunit
Tssr85681	9	65294275 to 65294341	66	+	TSS region	transcription start site region 85681
Tssr85682	9	65294370 to 65294375	5	+	TSS region	transcription start site region 85682
Tssr85683	9	65294395 to 65294417	22	+	TSS region	transcription start site region 85683
Tssr85684	9	65294427 to 65294437	10	+	TSS region	transcription start site region 85684
Tssr85685	9	65294440 to 65294444	4	+	TSS region	transcription start site region 85685
Tssr85686	9	65294557 to 65294576	19	+	TSS region	transcription start site region 85686