Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:64473039-64803658

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Megf11 9 64385626 to 64709205 323579 + protein coding gene multiple EGF-like-domains 11
Tssr85618 9 64485969 to 64485973 4 + TSS region transcription start site region 85618
Tssr85619 9 64544927 to 64544930 3 + TSS region transcription start site region 85619
Tssr85620 9 64546895 to 64546901 6 + TSS region transcription start site region 85620
Cpgi21929 9 64638039 to 64638658 619 CpG island CpG island 21929
Gm36311 9 64674062 to 64685926 11864 - lncRNA gene predicted gene, 36311
Tssr90149 9 64704581 to 64704584 3 - TSS region transcription start site region 90149
Tssr90150 9 64704587 to 64704592 5 - TSS region transcription start site region 90150
Tssr90151 9 64704596 to 64704605 9 - TSS region transcription start site region 90151
Tssr90152 9 64704610 to 64704621 11 - TSS region transcription start site region 90152
Tssr2908 9 64704845 to 64704846 1 + TSS region transcription start site region 2908
Rab11a 9 64715300 to 64737756 22456 - protein coding gene RAB11A, member RAS oncogene family
Tssr90153 9 64726583 to 64726587 4 - TSS region transcription start site region 90153
Gm47308 9 64726624 to 64726730 106 - miRNA gene predicted gene, 47308
Tssr85621 9 64736356 to 64736363 7 + TSS region transcription start site region 85621
Cpgi21930 9 64736767 to 64737883 1116 CpG island CpG island 21930
Tssr90154 9 64737634 to 64737645 11 - TSS region transcription start site region 90154
Tssr90155 9 64737655 to 64737661 6 - TSS region transcription start site region 90155
Tssr90156 9 64737684 to 64737763 79 - TSS region transcription start site region 90156
n-TQctg9 9 64738046 to 64738117 71 + tRNA gene nuclear encoded tRNA glutamine 9 (anticodon CTG)
Gm36365 9 64771611 to 64779362 7751 + lncRNA gene predicted gene, 36365
Tssr85622 9 64789649 to 64789657 8 + TSS region transcription start site region 85622
Tssr85623 9 64789663 to 64789677 14 + TSS region transcription start site region 85623
Tssr2909 9 64790794 to 64790810 16 - TSS region transcription start site region 2909
Tssr90157 9 64790822 to 64790828 6 - TSS region transcription start site region 90157
Tssr85624 9 64790956 to 64790967 11 + TSS region transcription start site region 85624
Gm36459 9 64794455 to 64811415 16960 - lncRNA gene predicted gene, 36459
Tssr85625 9 64794596 to 64794606 10 + TSS region transcription start site region 85625
Tssr85626 9 64794697 to 64794726 29 + TSS region transcription start site region 85626
Tssr2910 9 64796377 to 64796386 9 - TSS region transcription start site region 2910
Tssr85627 9 64797704 to 64797711 7 + TSS region transcription start site region 85627
Tssr90158 9 64803438 to 64803474 36 - TSS region transcription start site region 90158