Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:64215969-64755973

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map2k1 9 64185770 to 64253605 67835 - protein coding gene mitogen-activated protein kinase kinase 1
Gm24106 9 64225523 to 64225649 126 + miRNA gene predicted gene, 24106
Gm48855 9 64228339 to 64230795 2456 + lincRNA gene predicted gene, 48855
Tssr90138 9 64230772 to 64230778 6 - TSS region transcription start site region 90138
Uchl4 9 64235201 to 64236362 1161 + protein coding gene ubiquitin carboxyl-terminal esterase L4
Tssr90139 9 64242709 to 64242717 8 - TSS region transcription start site region 90139
Cpgi21925 9 64252776 to 64253924 1148 CpG island CpG island 21925
Tssr90140 9 64253542 to 64253553 11 - TSS region transcription start site region 90140
Tssr90141 9 64253568 to 64253614 46 - TSS region transcription start site region 90141
Tssr90142 9 64253617 to 64253635 18 - TSS region transcription start site region 90142
Cpgi21926 9 64281329 to 64282056 727 CpG island CpG island 21926
Tssr85609 9 64281575 to 64281630 55 + TSS region transcription start site region 85609
Tipin 9 64281581 to 64305424 23843 + protein coding gene timeless interacting protein
Tssr85610 9 64294003 to 64294022 19 + TSS region transcription start site region 85610
Gm24289 9 64295931 to 64296065 134 + snoRNA gene predicted gene, 24289
Dis3l 9 64306756 to 64341288 34532 - protein coding gene DIS3 like exosome 3'-5' exoribonuclease
Tssr90143 9 64306807 to 64306811 4 - TSS region transcription start site region 90143
Tssr85611 9 64321698 to 64321708 10 + TSS region transcription start site region 85611
Cpgi21927 9 64340275 to 64341506 1231 CpG island CpG island 21927
Tssr85612 9 64340411 to 64340447 36 + TSS region transcription start site region 85612
Tssr85613 9 64340704 to 64340726 22 + TSS region transcription start site region 85613
Tssr90144 9 64340801 to 64340822 21 - TSS region transcription start site region 90144
Tssr90145 9 64340983 to 64340994 11 - TSS region transcription start site region 90145
Tssr90146 9 64341019 to 64341038 19 - TSS region transcription start site region 90146
Tssr90147 9 64341145 to 64341228 83 - TSS region transcription start site region 90147
Tssr90148 9 64341292 to 64341311 19 - TSS region transcription start site region 90148
Cpgi21928 9 64385328 to 64387287 1959 CpG island CpG island 21928
Megf11 9 64385626 to 64709205 323579 + protein coding gene multiple EGF-like-domains 11
Tssr85614 9 64385646 to 64385657 11 + TSS region transcription start site region 85614
Tssr85615 9 64385675 to 64385698 23 + TSS region transcription start site region 85615
Tssr85616 9 64396627 to 64396632 5 + TSS region transcription start site region 85616
Tssr85617 9 64397721 to 64397726 5 + TSS region transcription start site region 85617
Tssr85618 9 64485969 to 64485973 4 + TSS region transcription start site region 85618
Tssr85619 9 64544927 to 64544930 3 + TSS region transcription start site region 85619
Tssr85620 9 64546895 to 64546901 6 + TSS region transcription start site region 85620
Cpgi21929 9 64638039 to 64638658 619 CpG island CpG island 21929
Gm36311 9 64674062 to 64685926 11864 - lncRNA gene predicted gene, 36311
Tssr90149 9 64704581 to 64704584 3 - TSS region transcription start site region 90149
Tssr90150 9 64704587 to 64704592 5 - TSS region transcription start site region 90150
Tssr90151 9 64704596 to 64704605 9 - TSS region transcription start site region 90151
Tssr90152 9 64704610 to 64704621 11 - TSS region transcription start site region 90152
Tssr2908 9 64704845 to 64704846 1 + TSS region transcription start site region 2908
Rab11a 9 64715300 to 64737756 22456 - protein coding gene RAB11A, member RAS oncogene family
Tssr90153 9 64726583 to 64726587 4 - TSS region transcription start site region 90153
Gm47308 9 64726624 to 64726730 106 - miRNA gene predicted gene, 47308
Tssr85621 9 64736356 to 64736363 7 + TSS region transcription start site region 85621
Cpgi21930 9 64736767 to 64737883 1116 CpG island CpG island 21930
Tssr90154 9 64737634 to 64737645 11 - TSS region transcription start site region 90154
Tssr90155 9 64737655 to 64737661 6 - TSS region transcription start site region 90155
Tssr90156 9 64737684 to 64737763 79 - TSS region transcription start site region 90156
n-TQctg9 9 64738046 to 64738117 71 + tRNA gene nuclear encoded tRNA glutamine 9 (anticodon CTG)