Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:64136101-64236119

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lctl 9 64117147 to 64138118 20971 + protein coding gene lactase-like
Zwilch 9 64137144 to 64172931 35787 - protein coding gene zwilch kinetochore protein
Tssr85595 9 64139273 to 64139277 4 + TSS region transcription start site region 85595
Tssr90130 9 64158047 to 64158049 2 - TSS region transcription start site region 90130
Cpgi21923 9 64172411 to 64173083 672 CpG island CpG island 21923
Tssr90131 9 64172889 to 64172918 29 - TSS region transcription start site region 90131
Tssr85596 9 64173364 to 64173388 24 + TSS region transcription start site region 85596
Rpl4 9 64173387 to 64178562 5175 + protein coding gene ribosomal protein L4
Tssr2907 9 64173398 to 64173399 1 + TSS region transcription start site region 2907
Tssr85597 9 64174912 to 64174972 60 + TSS region transcription start site region 85597
Gm23344 9 64175048 to 64175115 67 + snoRNA gene predicted gene, 23344
Tssr85598 9 64175422 to 64175426 4 + TSS region transcription start site region 85598
Snord16a 9 64175432 to 64175522 90 + snoRNA gene small nucleolar RNA, C/D box 16A
Tssr85599 9 64175588 to 64175613 25 + TSS region transcription start site region 85599
Gm22571 9 64175873 to 64175942 69 + snoRNA gene predicted gene, 22571
Gm23136 9 64176661 to 64176759 98 + snoRNA gene predicted gene, 23136
Tssr85600 9 64176969 to 64177018 49 + TSS region transcription start site region 85600
Gm22455 9 64177123 to 64177193 70 + snoRNA gene predicted gene, 22455
Tssr85601 9 64177374 to 64177398 24 + TSS region transcription start site region 85601
Tssr85602 9 64177441 to 64177452 11 + TSS region transcription start site region 85602
Tssr85603 9 64177712 to 64177738 26 + TSS region transcription start site region 85603
Tssr85604 9 64177752 to 64177780 28 + TSS region transcription start site region 85604
Tssr90132 9 64177788 to 64177811 23 - TSS region transcription start site region 90132
Tssr85605 9 64178275 to 64178356 81 + TSS region transcription start site region 85605
Tssr90133 9 64178343 to 64178379 36 - TSS region transcription start site region 90133
Tssr90134 9 64178395 to 64178449 54 - TSS region transcription start site region 90134
Tssr85606 9 64178400 to 64178416 16 + TSS region transcription start site region 85606
Cpgi21924 9 64179176 to 64179638 462 CpG island CpG island 21924
Tssr85607 9 64179271 to 64179282 11 + TSS region transcription start site region 85607
Tssr85608 9 64179289 to 64179349 60 + TSS region transcription start site region 85608
Snapc5 9 64179297 to 64182688 3391 + protein coding gene small nuclear RNA activating complex, polypeptide 5
Tssr90135 9 64184286 to 64184297 11 - TSS region transcription start site region 90135
Map2k1 9 64185770 to 64253605 67835 - protein coding gene mitogen-activated protein kinase kinase 1
Tssr90136 9 64186101 to 64186119 18 - TSS region transcription start site region 90136
Tssr90137 9 64214633 to 64214638 5 - TSS region transcription start site region 90137
Gm24106 9 64225523 to 64225649 126 + miRNA gene predicted gene, 24106
Gm48855 9 64228339 to 64230795 2456 + lincRNA gene predicted gene, 48855
Tssr90138 9 64230772 to 64230778 6 - TSS region transcription start site region 90138
Uchl4 9 64235201 to 64236362 1161 + protein coding gene ubiquitin carboxyl-terminal esterase L4