MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:63512051-63693129

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Iqch	9	63421455 to 63602493	181038	-	protein coding gene	IQ motif containing H
Gm35809	9	63480686 to 63534004	53318	+	lncRNA gene	predicted gene, 35809
Gm39358	9	63565519 to 63571734	6215	+	lncRNA gene	predicted gene, 39358
Cpgi21916	9	63602051 to 63603129	1078		CpG island	CpG island 21916
Tssr90098	9	63602449 to 63602460	11	-	TSS region	transcription start site region 90098
Tssr90099	9	63602464 to 63602494	30	-	TSS region	transcription start site region 90099
Tssr90100	9	63602496 to 63602505	9	-	TSS region	transcription start site region 90100
Aagab	9	63602628 to 63641897	39269	+	protein coding gene	alpha- and gamma-adaptin binding protein
Tssr85581	9	63602650 to 63602703	53	+	TSS region	transcription start site region 85581
D9Dcr1	9	63603875 to 63603970	95		DNA segment	DNA segment, Chr 9, Derry C. Roopenian 1
D9Mit106	9	63603876 to 63603974	98		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 106
avc3	9	63603876 to 68829021	5225145		heritable phenotypic marker	atrioventricular canal 3
Smad3	9	63646767 to 63757994	111227	-	protein coding gene	SMAD family member 3
Tssr90101	9	63666789 to 63666796	7	-	TSS region	transcription start site region 90101
Tssr90102	9	63666802 to 63666813	11	-	TSS region	transcription start site region 90102
Tssr90103	9	63666823 to 63666845	22	-	TSS region	transcription start site region 90103
Tssr90104	9	63667550 to 63667568	18	-	TSS region	transcription start site region 90104
Tssr85582	9	63690768 to 63690816	48	+	TSS region	transcription start site region 85582