Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:62692927-62852941

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itga11 9 62677855 to 62783979 106124 + protein coding gene integrin alpha 11
Tssr85558 9 62753365 to 62753413 48 + TSS region transcription start site region 85558
Tssr85559 9 62772927 to 62772941 14 + TSS region transcription start site region 85559
Tssr85560 9 62783520 to 62783539 19 + TSS region transcription start site region 85560
Gm7653 9 62789904 to 62790411 507 + pseudogene predicted gene 7653
Tssr90064 9 62790872 to 62790878 6 - TSS region transcription start site region 90064
Fem1b 9 62791824 to 62811648 19824 - protein coding gene feminization 1 homolog b (C. elegans)
Tssr90065 9 62794916 to 62794955 39 - TSS region transcription start site region 90065
Tssr90066 9 62795003 to 62795007 4 - TSS region transcription start site region 90066
Tssr90067 9 62796494 to 62796532 38 - TSS region transcription start site region 90067
Tssr90068 9 62796912 to 62796928 16 - TSS region transcription start site region 90068
Gm26609 9 62804478 to 62808234 3756 + lincRNA gene predicted gene, 26609
Tssr90069 9 62809852 to 62809861 9 - TSS region transcription start site region 90069
Cpgi21901 9 62810781 to 62812231 1450 CpG island CpG island 21901
Tssr90070 9 62811426 to 62811476 50 - TSS region transcription start site region 90070
Tssr90071 9 62811592 to 62811659 67 - TSS region transcription start site region 90071
Tssr90072 9 62811663 to 62811668 5 - TSS region transcription start site region 90072
Tssr90073 9 62811669 to 62811676 7 - TSS region transcription start site region 90073
Tssr90074 9 62811835 to 62811846 11 - TSS region transcription start site region 90074
Tssr90075 9 62811866 to 62811955 89 - TSS region transcription start site region 90075
Tssr90076 9 62812805 to 62812842 37 - TSS region transcription start site region 90076
Tssr90077 9 62819577 to 62819612 35 - TSS region transcription start site region 90077
Tssr85561 9 62825570 to 62825581 11 + TSS region transcription start site region 85561
Tssr85562 9 62826085 to 62826099 14 + TSS region transcription start site region 85562
Cpgi21902 9 62828713 to 62829037 324 CpG island CpG island 21902
Tssr85563 9 62829095 to 62829121 26 + TSS region transcription start site region 85563
Cpgi21903 9 62838539 to 62839325 786 CpG island CpG island 21903
Tssr85564 9 62838579 to 62838603 24 + TSS region transcription start site region 85564
Tssr85565 9 62838612 to 62838630 18 + TSS region transcription start site region 85565
Tssr85566 9 62838642 to 62838682 40 + TSS region transcription start site region 85566
Tssr85567 9 62838767 to 62838816 49 + TSS region transcription start site region 85567
Cln6 9 62838787 to 62852002 13215 + protein coding gene ceroid-lipofuscinosis, neuronal 6
Tssr85568 9 62838831 to 62838886 55 + TSS region transcription start site region 85568
Gm10653 9 62841477 to 62862024 20547 - pseudogene predicted gene 10653
Tssr85569 9 62844591 to 62844612 21 + TSS region transcription start site region 85569
Tssr85570 9 62846000 to 62846004 4 + TSS region transcription start site region 85570
Tssr2901 9 62846970 to 62846989 19 + TSS region transcription start site region 2901
Tssr85571 9 62851047 to 62851054 7 + TSS region transcription start site region 85571
Tssr85572 9 62851418 to 62851443 25 + TSS region transcription start site region 85572
Tssr85573 9 62851625 to 62851656 31 + TSS region transcription start site region 85573