Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:61996790-62357605

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Paqr5 9 61953738 to 62026790 73052 - protein coding gene progestin and adipoQ receptor family member V
9530006O14Rik 9 62006678 to 62007893 1215 unclassified gene RIKEN cDNA 9530006O14 gene
Gm23221 9 62020594 to 62020686 92 + unclassified non-coding RNA gene predicted gene, 23221
Cpgi21888 9 62026484 to 62027025 541 CpG island CpG island 21888
Tssr90026 9 62026788 to 62026833 45 - TSS region transcription start site region 90026
Tssr2898 9 62026853 to 62026858 5 - TSS region transcription start site region 2898
Cpgi21889 9 62040163 to 62040485 322 CpG island CpG island 21889
Glce 9 62057248 to 62122655 65407 - protein coding gene glucuronyl C5-epimerase
Cpgi21890 9 62121608 to 62123294 1686 CpG island CpG island 21890
Mir5133 9 62122518 to 62122594 76 - miRNA gene microRNA 5133
Tssr90027 9 62122596 to 62122617 21 - TSS region transcription start site region 90027
Tssr90028 9 62122626 to 62122651 25 - TSS region transcription start site region 90028
Tssr90029 9 62122654 to 62122665 11 - TSS region transcription start site region 90029
Tssr90030 9 62122677 to 62122688 11 - TSS region transcription start site region 90030
Tssr85519 9 62122988 to 62122991 3 + TSS region transcription start site region 85519
Gm39351 9 62140661 to 62147824 7163 + lncRNA gene predicted gene, 39351
Gm35227 9 62166790 to 62187605 20815 + lncRNA gene predicted gene, 35227
Gm47262 9 62241670 to 62243997 2327 + lincRNA gene predicted gene, 47262
A730043L09Rik 9 62242596 to 62244100 1504 - lincRNA gene RIKEN cDNA A730043L09 gene
Gm25603 9 62242763 to 62242867 104 - miRNA gene predicted gene, 25603
Cpgi21891 9 62244032 to 62244262 230 CpG island CpG island 21891
D9Mit208 9 62266473 to 62266581 108 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 208
1700013K18Rik 9 62267375 to 62267842 467 unclassified gene RIKEN cDNA 1700013K18 gene
Spesp1 9 62270729 to 62282179 11450 - protein coding gene sperm equatorial segment protein 1
Cpgi21892 9 62272986 to 62273315 329 CpG island CpG island 21892
Cpgi21893 9 62281901 to 62282343 442 CpG island CpG island 21893
Tssr90031 9 62282136 to 62282143 7 - TSS region transcription start site region 90031
Tssr90032 9 62282145 to 62282154 9 - TSS region transcription start site region 90032
Tssr90033 9 62282158 to 62282163 5 - TSS region transcription start site region 90033
Tssr90034 9 62282165 to 62282217 52 - TSS region transcription start site region 90034
Gm35288 9 62298502 to 62336649 38147 + lincRNA gene predicted gene, 35288
Cpgi21894 9 62340687 to 62344855 4168 CpG island CpG island 21894
Tssr90035 9 62341155 to 62341165 10 - TSS region transcription start site region 90035
Tssr85520 9 62341338 to 62341390 52 + TSS region transcription start site region 85520
Anp32a 9 62341343 to 62378804 37461 + protein coding gene acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
Tssr85521 9 62341393 to 62341416 23 + TSS region transcription start site region 85521
Tssr85522 9 62341441 to 62341452 11 + TSS region transcription start site region 85522
Gm20346 9 62341502 to 62344600 3098 - protein coding gene predicted gene, 20346
Tssr85523 9 62341893 to 62341926 33 + TSS region transcription start site region 85523
Tssr85524 9 62342059 to 62342082 23 + TSS region transcription start site region 85524
Tssr85525 9 62342089 to 62342112 23 + TSS region transcription start site region 85525
Tssr85526 9 62342121 to 62342145 24 + TSS region transcription start site region 85526
Tssr2899 9 62342338 to 62342359 21 + TSS region transcription start site region 2899
Tssr85527 9 62342449 to 62342473 24 + TSS region transcription start site region 85527
Tssr90036 9 62343272 to 62343310 38 - TSS region transcription start site region 90036
Tssr90037 9 62343566 to 62343599 33 - TSS region transcription start site region 90037
Tssr90038 9 62344018 to 62344058 40 - TSS region transcription start site region 90038
Tssr90039 9 62344639 to 62344668 29 - TSS region transcription start site region 90039
Tssr85528 9 62344755 to 62344771 16 + TSS region transcription start site region 85528
Tssr85529 9 62344783 to 62344799 16 + TSS region transcription start site region 85529
Tssr85530 9 62344873 to 62344910 37 + TSS region transcription start site region 85530
Tssr2900 9 62344903 to 62344908 5 - TSS region transcription start site region 2900
Tssr85531 9 62345357 to 62345367 10 + TSS region transcription start site region 85531
Tssr85532 9 62345387 to 62345405 18 + TSS region transcription start site region 85532
Tssr85533 9 62345423 to 62345442 19 + TSS region transcription start site region 85533
Tssr85534 9 62345446 to 62345453 7 + TSS region transcription start site region 85534
Tssr85535 9 62351166 to 62351170 4 + TSS region transcription start site region 85535
Tssr85536 9 62351459 to 62351460 1 + TSS region transcription start site region 85536