Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:60848862-61348994

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Uaca 9 60794542 to 60880370 85828 + protein coding gene uveal autoantigen with coiled-coil domains and ankyrin repeats
Gm33643 9 60864683 to 60869568 4885 - lncRNA gene predicted gene, 33643
Tssr85496 9 60866113 to 60866164 51 + TSS region transcription start site region 85496
Tssr85497 9 60885890 to 60885894 4 + TSS region transcription start site region 85497
Gm47923 9 60919223 to 60949373 30150 + lincRNA gene predicted gene, 47923
Gm5122 9 61017069 to 61019797 2728 + lincRNA gene predicted gene 5122
Gm39348 9 61051399 to 61055873 4474 - lincRNA gene predicted gene, 39348
Gm33699 9 61052172 to 61056923 4751 + lincRNA gene predicted gene, 33699
Tssr85498 9 61054637 to 61054651 14 + TSS region transcription start site region 85498
Cpgi21876 9 61056573 to 61056814 241 CpG island CpG island 21876
Gm46116 9 61056933 to 61059180 2247 + lncRNA gene predicted gene, 46116
D9Mit143 9 61074126 to 61074267 141 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 143
Cpgi21877 9 61081727 to 61081883 156 CpG island CpG island 21877
Gm34004 9 61081893 to 61116705 34812 + lincRNA gene predicted gene, 34004
D9Mit72 9 61098862 to 61098994 132 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 72
4933433G08Rik 9 61103012 to 61105385 2373 - lincRNA gene RIKEN cDNA 4933433G08 gene
Tssr90004 9 61105380 to 61105392 12 - TSS region transcription start site region 90004
Gm33914 9 61109619 to 61127031 17412 - lincRNA gene predicted gene, 33914
Tssr85499 9 61110965 to 61110997 32 + TSS region transcription start site region 85499
I730028E13Rik 9 61138515 to 61145259 6744 + lincRNA gene RIKEN cDNA I730028E13 gene
Tssr85500 9 61139186 to 61139207 21 + TSS region transcription start site region 85500
Tssr2895 9 61156918 to 61156937 19 + TSS region transcription start site region 2895
Tssr85501 9 61200379 to 61200381 2 + TSS region transcription start site region 85501
Gm34105 9 61206679 to 61212915 6236 + lincRNA gene predicted gene, 34105
Tssr85502 9 61225604 to 61225622 18 + TSS region transcription start site region 85502
B930092H01Rik 9 61259227 to 61293809 34582 - lincRNA gene RIKEN cDNA B930092H01 gene
Gm34264 9 61312285 to 61328613 16328 - lncRNA gene predicted gene, 34264
Cpgi21878 9 61315716 to 61315968 252 CpG island CpG island 21878
Gm39349 9 61339483 to 61348728 9245 + lncRNA gene predicted gene, 39349