Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:58018677-58128823

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp11a1 9 58006411 to 58027023 20612 + protein coding gene cytochrome P450, family 11, subfamily a, polypeptide 1
Tssr85352 9 58021949 to 58021964 15 + TSS region transcription start site region 85352
Tssr89839 9 58025121 to 58025154 33 - TSS region transcription start site region 89839
Tssr85353 9 58026951 to 58026962 11 + TSS region transcription start site region 85353
Tssr2889 9 58026994 to 58026999 5 + TSS region transcription start site region 2889
Ccdc33 9 58028677 to 58118823 90146 - protein coding gene coiled-coil domain containing 33
Gm16130 9 58032274 to 58048997 16723 + antisense lncRNA gene predicted gene 16130
D9Mit141.1 9 58062475 to 58062591 116 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 141.1
D9Mit141 9 58062603 to 58062707 104 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 141
Stra6 9 58063788 to 58153996 90208 + protein coding gene stimulated by retinoic acid gene 6
Tssr85354 9 58079337 to 58079356 19 + TSS region transcription start site region 85354
Tssr85355 9 58079358 to 58079382 24 + TSS region transcription start site region 85355
Tssr89840 9 58094326 to 58094328 2 - TSS region transcription start site region 89840
Tssr89841 9 58102258 to 58102269 11 - TSS region transcription start site region 89841
Tssr89842 9 58102272 to 58102305 33 - TSS region transcription start site region 89842
Tssr89843 9 58102313 to 58102316 3 - TSS region transcription start site region 89843
1700120E02Rik 9 58102344 to 58103055 711 unclassified gene RIKEN cDNA 1700120E02 gene
Cpgi21838 9 58113416 to 58113709 293 CpG island CpG island 21838
Gm16131 9 58117815 to 58118989 1174 + antisense lncRNA gene predicted gene 16131
Tssr89844 9 58118818 to 58118832 14 - TSS region transcription start site region 89844