Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:57771350-57922223

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fecq4 9 47631726 to 57897921 10266195 QTL fecundity QTL 4
Tssr85329 9 57777829 to 57777867 38 + TSS region transcription start site region 85329
Gm17231 9 57777865 to 57834295 56430 + antisense lncRNA gene predicted gene 17231
Arid3b 9 57790353 to 57836793 46440 - protein coding gene AT rich interactive domain 3B (BRIGHT-like)
Tssr89835 9 57792187 to 57792209 22 - TSS region transcription start site region 89835
Tssr89836 9 57796562 to 57796589 27 - TSS region transcription start site region 89836
Tssr85330 9 57825918 to 57825945 27 + TSS region transcription start site region 85330
Tssr85331 9 57827284 to 57827296 12 + TSS region transcription start site region 85331
Cpgi21834 9 57831364 to 57831869 505 CpG island CpG island 21834
Cpgi21835 9 57836177 to 57837121 944 CpG island CpG island 21835
Tssr89837 9 57836713 to 57836805 92 - TSS region transcription start site region 89837
Gm7547 9 57837863 to 57838293 430 - pseudogene predicted gene 7547
Gm9715 9 57846350 to 57847223 873 + pseudogene predicted gene 9715
Neogq1 9 57897764 to 86239920 28342156 QTL neonatal growth QTL 1
Brm1 9 57897764 to 57897921 157 QTL brachyury modifier 1
D9Mit48 9 57897764 to 57897921 157 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 48
Bbaa9 9 57897764 to 71574472 13676708 QTL B.burgdorferi-associated arthritis 9
Cpgi21836 9 57910465 to 57911220 755 CpG island CpG island 21836
Tssr85332 9 57910473 to 57910490 17 + TSS region transcription start site region 85332
Tssr85333 9 57910506 to 57910530 24 + TSS region transcription start site region 85333
Tssr85334 9 57910542 to 57910552 10 + TSS region transcription start site region 85334
Tssr85335 9 57910974 to 57911023 49 + TSS region transcription start site region 85335
Ubl7 9 57910979 to 57929968 18989 + protein coding gene ubiquitin-like 7 (bone marrow stromal cell-derived)
Tssr85336 9 57911025 to 57911036 11 + TSS region transcription start site region 85336
Tssr85337 9 57911039 to 57911050 11 + TSS region transcription start site region 85337
Tssr85338 9 57911094 to 57911095 1 + TSS region transcription start site region 85338
Tssr85339 9 57911102 to 57911115 13 + TSS region transcription start site region 85339
Tssr85340 9 57911139 to 57911150 11 + TSS region transcription start site region 85340