MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:57055435-57095443

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ptpn9	9	56994968 to 57062808	67840	+	protein coding gene	protein tyrosine phosphatase, non-receptor type 9
Gm10658	9	57056897 to 57071966	15069	-	antisense lncRNA gene	predicted gene 10658
Tssr89752	9	57071850 to 57071862	12	-	TSS region	transcription start site region 89752
Tssr89753	9	57071879 to 57071905	26	-	TSS region	transcription start site region 89753
Cpgi21807	9	57071928 to 57074202	2274		CpG island	CpG island 21807
Tssr85282	9	57072024 to 57072048	24	+	TSS region	transcription start site region 85282
Sin3a	9	57072040 to 57128366	56326	+	protein coding gene	transcriptional regulator, SIN3A (yeast)
Tssr85283	9	57072065 to 57072076	11	+	TSS region	transcription start site region 85283
Tssr85284	9	57073735 to 57073754	19	+	TSS region	transcription start site region 85284
Tssr85285	9	57073858 to 57073872	14	+	TSS region	transcription start site region 85285
Cpgi21808	9	57074454 to 57074607	153		CpG island	CpG island 21808
2700012I20Rik	9	57075216 to 57076013	797	-	lincRNA gene	RIKEN cDNA 2700012I20 gene
Tssr2884	9	57075435 to 57075443	8	+	TSS region	transcription start site region 2884
Cpgi21809	9	57075675 to 57077525	1850		CpG island	CpG island 21809
Tssr85286	9	57076343 to 57076387	44	+	TSS region	transcription start site region 85286
Tssr85287	9	57076395 to 57076411	16	+	TSS region	transcription start site region 85287
Tssr85288	9	57094463 to 57094474	11	+	TSS region	transcription start site region 85288
Tssr85289	9	57095362 to 57095379	17	+	TSS region	transcription start site region 85289