Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:53841457-54045301

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adip20b 9 48789608 to 53884418 5094810 QTL adiposity 20b
Tssr85148 9 53850243 to 53850257 14 + TSS region transcription start site region 85148
Sln 9 53850251 to 53853849 3598 + protein coding gene sarcolipin
Gm16380 9 53884084 to 53884561 477 + pseudogene predicted pseudogene 16380
Cpgi21760 9 53884392 to 53884595 203 CpG island CpG island 21760
Gm39340 9 53899252 to 53901589 2337 + lncRNA gene predicted gene, 39340
Elmod1 9 53911457 to 53975301 63844 - protein coding gene ELMO/CED-12 domain containing 1
Tssr89615 9 53912813 to 53912817 4 - TSS region transcription start site region 89615
Tssr89616 9 53936090 to 53936097 7 - TSS region transcription start site region 89616
Tssr89617 9 53936100 to 53936105 5 - TSS region transcription start site region 89617
Cpgi21761 9 53974522 to 53975502 980 CpG island CpG island 21761
Tssr89618 9 53975097 to 53975115 18 - TSS region transcription start site region 89618
Tssr89619 9 53975120 to 53975202 82 - TSS region transcription start site region 89619
Tssr89620 9 53975246 to 53975348 102 - TSS region transcription start site region 89620
Tssr89621 9 53975352 to 53975363 11 - TSS region transcription start site region 89621
Tnfaip8l3 9 54025606 to 54068411 42805 - protein coding gene tumor necrosis factor, alpha-induced protein 8-like 3
Gm48346 9 54043312 to 54047798 4486 + lincRNA gene predicted gene, 48346