MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:51763529-51943540

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tdmq1	9	40508298 to 51897370	11389072		QTL	type 2 diabetes modifying QTL 1
Gm40520	9	51752624 to 51765186	12562	-	lncRNA gene	predicted gene, 40520
Cpgi21743	9	51764686 to 51766238	1552		CpG island	CpG island 21743
Tssr85091	9	51765304 to 51765317	13	+	TSS region	transcription start site region 85091
Tssr85092	9	51765325 to 51765364	39	+	TSS region	transcription start site region 85092
Arhgap20	9	51765352 to 51853059	87707	+	protein coding gene	Rho GTPase activating protein 20
Tssr85093	9	51765418 to 51765425	7	+	TSS region	transcription start site region 85093
Cpgi21744	9	51766629 to 51766784	155		CpG island	CpG island 21744
Arhgap20os	9	51839493 to 51875885	36392	-	antisense lncRNA gene	Rho GTPase activating protein 20, opposite strand
Tssr85094	9	51853529 to 51853540	11	+	TSS region	transcription start site region 85094
Tssr89550	9	51875879 to 51875887	8	-	TSS region	transcription start site region 89550
D9Mit1006	9	51897240 to 51897370	130		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 1006
Tssr85095	9	51914421 to 51914434	13	+	TSS region	transcription start site region 85095
4933407I05Rik	9	51914429 to 51927003	12574	+	lincRNA gene	RIKEN cDNA 4933407I05 gene
Tssr85096	9	51914439 to 51914467	28	+	TSS region	transcription start site region 85096
Gm6980	9	51915912 to 51924610	8698	-	lincRNA gene	predicted gene 6980
Fdx1	9	51943306 to 51963556	20250	-	protein coding gene	ferredoxin 1
Tssr89551	9	51943371 to 51943375	4	-	TSS region	transcription start site region 89551