MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:50872739-51072743

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppp2r1b	9	50856617 to 50899313	42696	+	protein coding gene	protein phosphatase 2, regulatory subunit A, beta
Tssr85077	9	50885488 to 50885498	10	+	TSS region	transcription start site region 85077
Gm25558	9	50887950 to 50888055	105	+	snRNA gene	predicted gene, 25558
Sik2	9	50892801 to 51009073	116272	-	protein coding gene	salt inducible kinase 2
D9Mit193	9	50897870 to 50897992	122		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 193
Tssr2870	9	50905552 to 50905577	25	+	TSS region	transcription start site region 2870
Tssr89521	9	50972739 to 50972743	4	-	TSS region	transcription start site region 89521
Cpgi21737	9	51008047 to 51009521	1474		CpG island	CpG island 21737
Tssr89522	9	51008966 to 51009080	114	-	TSS region	transcription start site region 89522
Gm32681	9	51046418 to 51069231	22813	+	lncRNA gene	predicted gene, 32681
Layn	9	51055023 to 51077209	22186	-	protein coding gene	layilin
Tssr89523	9	51056443 to 51056460	17	-	TSS region	transcription start site region 89523
Tssr89524	9	51056701 to 51056703	2	-	TSS region	transcription start site region 89524
Tssr89525	9	51056975 to 51056996	21	-	TSS region	transcription start site region 89525
Tssr89526	9	51057011 to 51057029	18	-	TSS region	transcription start site region 89526
Tssr89527	9	51057074 to 51057085	11	-	TSS region	transcription start site region 89527
Tssr85078	9	51062174 to 51062191	17	+	TSS region	transcription start site region 85078
Tssr89528	9	51068102 to 51068120	18	-	TSS region	transcription start site region 89528