Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:50807801-51094073

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alg9 9 50775019 to 50843542 68523 + protein coding gene asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
Tssr89520 9 50809206 to 50809211 5 - TSS region transcription start site region 89520
Tssr85075 9 50835302 to 50835329 27 + TSS region transcription start site region 85075
C130081A10Rik 9 50848285 to 50849738 1453 unclassified gene RIKEN cDNA C130081A10 gene
Cpgi21736 9 50856394 to 50857534 1140 CpG island CpG island 21736
Ppp2r1b 9 50856617 to 50899313 42696 + protein coding gene protein phosphatase 2, regulatory subunit A, beta
Tssr85076 9 50856938 to 50856987 49 + TSS region transcription start site region 85076
Tssr85077 9 50885488 to 50885498 10 + TSS region transcription start site region 85077
Gm25558 9 50887950 to 50888055 105 + snRNA gene predicted gene, 25558
Sik2 9 50892801 to 51009073 116272 - protein coding gene salt inducible kinase 2
D9Mit193 9 50897870 to 50897992 122 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 193
Tssr2870 9 50905552 to 50905577 25 + TSS region transcription start site region 2870
Tssr89521 9 50972739 to 50972743 4 - TSS region transcription start site region 89521
Cpgi21737 9 51008047 to 51009521 1474 CpG island CpG island 21737
Tssr89522 9 51008966 to 51009080 114 - TSS region transcription start site region 89522
Gm32681 9 51046418 to 51069231 22813 + lncRNA gene predicted gene, 32681
Layn 9 51055023 to 51077209 22186 - protein coding gene layilin
Tssr89523 9 51056443 to 51056460 17 - TSS region transcription start site region 89523
Tssr89524 9 51056701 to 51056703 2 - TSS region transcription start site region 89524
Tssr89525 9 51056975 to 51056996 21 - TSS region transcription start site region 89525
Tssr89526 9 51057011 to 51057029 18 - TSS region transcription start site region 89526
Tssr89527 9 51057074 to 51057085 11 - TSS region transcription start site region 89527
Tssr85078 9 51062174 to 51062191 17 + TSS region transcription start site region 85078
Tssr89528 9 51068102 to 51068120 18 - TSS region transcription start site region 89528
Cpgi21738 9 51076806 to 51077105 299 CpG island CpG island 21738
Tssr89529 9 51077030 to 51077062 32 - TSS region transcription start site region 89529
Tssr89530 9 51077064 to 51077100 36 - TSS region transcription start site region 89530
Tssr89531 9 51077110 to 51077121 11 - TSS region transcription start site region 89531
4833427G06Rik 9 51081313 to 51102078 20765 - protein coding gene RIKEN cDNA 4833427G06 gene