MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:50503743-50553773

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Plet1os	9	50488799 to 50504805	16006	-	antisense lncRNA gene	placenta expressed transcript 1, opposite strand
Plet1	9	50494525 to 50505482	10957	+	protein coding gene	placenta expressed transcript 1
Tssr85032	9	50504286 to 50504297	11	+	TSS region	transcription start site region 85032
Tssr85033	9	50504305 to 50504346	41	+	TSS region	transcription start site region 85033
Tssr85034	9	50504349 to 50504367	18	+	TSS region	transcription start site region 85034
Tssr85035	9	50504552 to 50504566	14	+	TSS region	transcription start site region 85035
Tssr89478	9	50504779 to 50504821	42	-	TSS region	transcription start site region 89478
Tssr85036	9	50506395 to 50506398	3	+	TSS region	transcription start site region 85036
Tssr89479	9	50507754 to 50507765	11	-	TSS region	transcription start site region 89479
Pts	9	50521617 to 50528641	7024	-	protein coding gene	6-pyruvoyl-tetrahydropterin synthase
Cpgi21725	9	50528213 to 50528876	663		CpG island	CpG island 21725
Tssr89480	9	50528642 to 50528698	56	-	TSS region	transcription start site region 89480
Tssr85037	9	50528743 to 50528773	30	+	TSS region	transcription start site region 85037
Gm47077	9	50528767 to 50533752	4985	+	antisense lncRNA gene	predicted gene, 47077
Bco2	9	50533087 to 50555181	22094	-	protein coding gene	beta-carotene oxygenase 2
D9Mit70	9	50550846 to 50551009	163		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 70
D9Mit70.1	9	50550899 to 50551028	129		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 70.1