Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:48420327-48480336

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc39 9 40734078 to 48440176 7706098 QTL susceptibility to lung cancer 39
Gm32131 9 48418879 to 48420522 1643 - lncRNA gene predicted gene, 32131
Nxpe1-ps 9 48420046 to 48431940 11894 + pseudogene neurexophilin and PC-esterase domain family, member 1, pseudogene
Tssr89382 9 48420567 to 48420578 11 - TSS region transcription start site region 89382
Tssr89383 9 48420599 to 48420638 39 - TSS region transcription start site region 89383
D9Mit154 9 48440047 to 48440176 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 154
D9Mit256 9 48443938 to 48444055 117 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 256
Tssr84983 9 48450260 to 48450268 8 + TSS region transcription start site region 84983
Tssr84984 9 48450285 to 48450294 9 + TSS region transcription start site region 84984
Tssr84985 9 48450295 to 48450324 29 + TSS region transcription start site region 84985
Tssr84986 9 48450327 to 48450336 9 + TSS region transcription start site region 84986
Gm5616 9 48450400 to 48450783 383 + pseudogene predicted gene 5616
Gm39335 9 48452097 to 48463225 11128 + lncRNA gene predicted gene, 39335
Tssr84987 9 48452336 to 48452345 9 + TSS region transcription start site region 84987
Gm8884 9 48454344 to 48454727 383 + lncRNA gene predicted gene 8884
Gm39334 9 48459419 to 48461196 1777 - lncRNA gene predicted gene, 39334
Rexo2 9 48468512 to 48480623 12111 - protein coding gene RNA exonuclease 2
Cpgi21715 9 48480067 to 48480839 772 CpG island CpG island 21715