Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:45983871-46183898

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pafah1b2 9 45965311 to 46012685 47374 - protein coding gene platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
Cpgi21699 9 45984161 to 45985164 1003 CpG island CpG island 21699
Tssr89300 9 45984377 to 45984381 4 - TSS region transcription start site region 89300
Tssr89301 9 45984519 to 45984524 5 - TSS region transcription start site region 89301
Tssr89302 9 45984528 to 45984561 33 - TSS region transcription start site region 89302
Tssr89303 9 45984562 to 45984586 24 - TSS region transcription start site region 89303
Tssr89304 9 45984777 to 45984808 31 - TSS region transcription start site region 89304
Tssr89305 9 45984816 to 45984855 39 - TSS region transcription start site region 89305
Tssr84820 9 45984925 to 45984943 18 + TSS region transcription start site region 84820
Tssr89306 9 45985365 to 45985415 50 - TSS region transcription start site region 89306
Tssr84821 9 46009261 to 46009269 8 + TSS region transcription start site region 84821
Tssr89307 9 46009780 to 46009782 2 - TSS region transcription start site region 89307
Cpgi21700 9 46012148 to 46013605 1457 CpG island CpG island 21700
Tssr89308 9 46012611 to 46012693 82 - TSS region transcription start site region 89308
Tssr84822 9 46012810 to 46012821 11 + TSS region transcription start site region 84822
Sik3 9 46012820 to 46224194 211374 + protein coding gene SIK family kinase 3
Tssr84823 9 46012822 to 46012860 38 + TSS region transcription start site region 84823
Tssr84824 9 46022446 to 46022457 11 + TSS region transcription start site region 84824
Tssr89309 9 46031227 to 46031228 1 - TSS region transcription start site region 89309
Tssr84825 9 46047966 to 46047970 4 + TSS region transcription start site region 84825
Tssr2852 9 46049815 to 46049829 14 + TSS region transcription start site region 2852
Tssr84826 9 46050112 to 46050116 4 + TSS region transcription start site region 84826
Tssr2853 9 46053416 to 46053427 11 + TSS region transcription start site region 2853
Gm46110 9 46054070 to 46072810 18740 - lncRNA gene predicted gene, 46110
Tssr84827 9 46083871 to 46083898 27 + TSS region transcription start site region 84827
Tssr89310 9 46112325 to 46112354 29 - TSS region transcription start site region 89310
D9Ertd26e 9 46115851 to 46116053 202 DNA segment DNA segment, Chr 9, ERATO Doi 26, expressed
Tssr84828 9 46119018 to 46119022 4 + TSS region transcription start site region 84828
Tssr84829 9 46127233 to 46127237 4 + TSS region transcription start site region 84829
Tssr89311 9 46154590 to 46154594 4 - TSS region transcription start site region 89311
Gm18915 9 46161026 to 46161946 920 + pseudogene predicted gene, 18915
Tssr84830 9 46173194 to 46173236 42 + TSS region transcription start site region 84830
Tssr89312 9 46175475 to 46175492 17 - TSS region transcription start site region 89312