Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:45954528-46014561

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sidt2 9 45937857 to 45955249 17392 - protein coding gene SID1 transmembrane family, member 2
A830035O19Rik 9 45954101 to 45955998 1897 + antisense lncRNA gene RIKEN cDNA A830035O19 gene
Cpgi21698 9 45954433 to 45955657 1224 CpG island CpG island 21698
Tssr89294 9 45954966 to 45954987 21 - TSS region transcription start site region 89294
Tssr89295 9 45955170 to 45955186 16 - TSS region transcription start site region 89295
Tssr89296 9 45955196 to 45955212 16 - TSS region transcription start site region 89296
Tssr89297 9 45955226 to 45955250 24 - TSS region transcription start site region 89297
Tssr89298 9 45955253 to 45955278 25 - TSS region transcription start site region 89298
Tssr89299 9 45955279 to 45955291 12 - TSS region transcription start site region 89299
Tssr84819 9 45955327 to 45955346 19 + TSS region transcription start site region 84819
D9Mit287 9 45956593 to 45956694 101 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 287
Pafah1b2 9 45965311 to 46012685 47374 - protein coding gene platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
Cpgi21699 9 45984161 to 45985164 1003 CpG island CpG island 21699
Tssr89300 9 45984377 to 45984381 4 - TSS region transcription start site region 89300
Tssr89301 9 45984519 to 45984524 5 - TSS region transcription start site region 89301
Tssr89302 9 45984528 to 45984561 33 - TSS region transcription start site region 89302
Tssr89303 9 45984562 to 45984586 24 - TSS region transcription start site region 89303
Tssr89304 9 45984777 to 45984808 31 - TSS region transcription start site region 89304
Tssr89305 9 45984816 to 45984855 39 - TSS region transcription start site region 89305
Tssr84820 9 45984925 to 45984943 18 + TSS region transcription start site region 84820
Tssr89306 9 45985365 to 45985415 50 - TSS region transcription start site region 89306
Tssr84821 9 46009261 to 46009269 8 + TSS region transcription start site region 84821
Tssr89307 9 46009780 to 46009782 2 - TSS region transcription start site region 89307
Cpgi21700 9 46012148 to 46013605 1457 CpG island CpG island 21700
Tssr89308 9 46012611 to 46012693 82 - TSS region transcription start site region 89308
Tssr84822 9 46012810 to 46012821 11 + TSS region transcription start site region 84822
Sik3 9 46012820 to 46224194 211374 + protein coding gene SIK family kinase 3
Tssr84823 9 46012822 to 46012860 38 + TSS region transcription start site region 84823