MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:45406630-45446648

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lfibq8	9	41490866 to 45432445	3941579		QTL	liver fibrosis QTL 8
Fxyd2	9	45399709 to 45410278	10569	+	protein coding gene	FXYD domain-containing ion transport regulator 2
Tssr84793	9	45407119 to 45407129	10	+	TSS region	transcription start site region 84793
Cpgi21691	9	45408136 to 45408350	214		CpG island	CpG island 21691
Tssr84794	9	45408268 to 45408310	42	+	TSS region	transcription start site region 84794
Tssr84795	9	45409984 to 45410068	84	+	TSS region	transcription start site region 84795
Tssr89263	9	45410075 to 45410099	24	-	TSS region	transcription start site region 89263
Tssr84796	9	45410075 to 45410086	11	+	TSS region	transcription start site region 84796
Tssr84797	9	45410104 to 45410125	21	+	TSS region	transcription start site region 84797
Tssr84798	9	45410128 to 45410169	41	+	TSS region	transcription start site region 84798
Gm48135	9	45413473 to 45414090	617	-	unclassified gene	predicted gene, 48135
4833428L15Rik	9	45416626 to 45431232	14606	-	antisense lncRNA gene	RIKEN cDNA 4833428L15 gene
Tssr84799	9	45426630 to 45426648	18	+	TSS region	transcription start site region 84799
Dscaml1	9	45427433 to 45753713	326280	+	protein coding gene	DS cell adhesion molecule like 1
Cpgi21692	9	45430000 to 45431642	1642		CpG island	CpG island 21692
Tssr84800	9	45430316 to 45430379	63	+	TSS region	transcription start site region 84800
Tssr84801	9	45431329 to 45431339	10	+	TSS region	transcription start site region 84801
Tssr84802	9	45431357 to 45431366	9	+	TSS region	transcription start site region 84802