Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:44627256-44717262

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ddx6 9 44604892 to 44640731 35839 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
Tssr84689 9 44630932 to 44630936 4 + TSS region transcription start site region 84689
Gm47234 9 44634195 to 44635103 908 + unclassified gene predicted gene, 47234
Tssr84690 9 44638713 to 44638720 7 + TSS region transcription start site region 84690
Tssr84691 9 44639148 to 44639158 10 + TSS region transcription start site region 84691
Tssr84692 9 44641352 to 44641355 3 + TSS region transcription start site region 84692
Tssr89186 9 44648837 to 44648886 49 - TSS region transcription start site region 89186
Gm47238 9 44650921 to 44652152 1231 + pseudogene predicted gene, 47238
Gm3953 9 44663928 to 44664716 788 - pseudogene predicted gene 3953
BC049987 9 44670453 to 44672238 1785 - lincRNA gene cDNA sequence BC049987
Tssr89187 9 44672256 to 44672262 6 - TSS region transcription start site region 89187
Tssr84693 9 44673185 to 44673188 3 + TSS region transcription start site region 84693
Tssr84694 9 44673227 to 44673246 19 + TSS region transcription start site region 84694
Treh 9 44673233 to 44686305 13072 + protein coding gene trehalase (brush-border membrane glycoprotein)
Phldb1 9 44686304 to 44735198 48894 - protein coding gene pleckstrin homology like domain, family B, member 1
Cpgi21670 9 44707896 to 44708673 777 CpG island CpG island 21670
Gm47239 9 44713010 to 44713713 703 + unclassified gene predicted gene, 47239
Tssr89188 9 44713196 to 44713218 22 - TSS region transcription start site region 89188
Cpgi21671 9 44715215 to 44716110 895 CpG island CpG island 21671