Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:42789479-43099510

Filter by:
21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phdlc1 9 34193323 to 42853570 8660247 QTL plasma HDL cholesterol 1
Grik4 9 42520412 to 42945154 424742 - protein coding gene glutamate receptor, ionotropic, kainate 4
D9Mit140 9 42853436 to 42853570 134 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 140
Gm27509 9 42862051 to 42862129 78 - miRNA gene predicted gene, 27509
Cpgi21622 9 42897232 to 42898203 971 CpG island CpG island 21622
Cpgi21623 9 42943507 to 42945204 1697 CpG island CpG island 21623
Tssr89062 9 42944479 to 42944510 31 - TSS region transcription start site region 89062
Gm47931 9 42946801 to 42947443 642 + lincRNA gene predicted gene, 47931
Gm36648 9 42947708 to 42949580 1872 + lncRNA gene predicted gene, 36648
Arhgef12 9 42963842 to 43105718 141876 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 12
Gm5831 9 42964872 to 42966080 1208 + pseudogene predicted gene 5831
Tssr89063 9 42966976 to 42966991 15 - TSS region transcription start site region 89063
Tssr89064 9 42968195 to 42968200 5 - TSS region transcription start site region 89064
Tssr89065 9 42985726 to 42985731 5 - TSS region transcription start site region 89065
Tssr89066 9 43051350 to 43051361 11 - TSS region transcription start site region 89066
Tssr89067 9 43064033 to 43064038 5 - TSS region transcription start site region 89067
Tssr89068 9 43071151 to 43071160 9 - TSS region transcription start site region 89068
Tssr89069 9 43071162 to 43071171 9 - TSS region transcription start site region 89069
Tssr89070 9 43071184 to 43071197 13 - TSS region transcription start site region 89070
Tssr89071 9 43071283 to 43071334 51 - TSS region transcription start site region 89071
Tssr89072 9 43071368 to 43071382 14 - TSS region transcription start site region 89072