Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:42461611-42681616

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbcel 9 42412316 to 42472276 59960 - protein coding gene tubulin folding cofactor E-like
Tssr89059 9 42463802 to 42463822 20 - TSS region transcription start site region 89059
Tssr84547 9 42466015 to 42466053 38 + TSS region transcription start site region 84547
Cpgi21620 9 42471869 to 42472443 574 CpG island CpG island 21620
Tssr89060 9 42472198 to 42472263 65 - TSS region transcription start site region 89060
Gm16322 9 42474555 to 42505662 31107 + antisense lncRNA gene predicted gene 16322
Grik4 9 42520412 to 42945154 424742 - protein coding gene glutamate receptor, ionotropic, kainate 4
Cpgi21621 9 42520531 to 42521220 689 CpG island CpG island 21621
Gm24420 9 42520773 to 42520831 58 - unclassified non-coding RNA gene predicted gene, 24420
Tssr84548 9 42571611 to 42571616 5 + TSS region transcription start site region 84548
9530085L02Rik 9 42608857 to 42613066 4209 unclassified non-coding RNA gene RIKEN cDNA 9530085L02 gene
Tssr84549 9 42673968 to 42674011 43 + TSS region transcription start site region 84549
Gm36590 9 42675009 to 42685183 10174 + lncRNA gene predicted gene, 36590
Sluc39d 9 42676189 to 42676285 96 QTL susceptibility to lung cancer 39d
Sluc39c 9 42676189 to 42676285 96 QTL susceptibility to lung cancer 39c
Sluc39b 9 42676189 to 42676285 96 QTL susceptibility to lung cancer 39b
Sluc39a 9 42676189 to 42676285 96 QTL susceptibility to lung cancer 39a
D9Mit254 9 42676189 to 42676285 96 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 254