Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:41922419-42122430

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr89000 9 41934051 to 41934053 2 - TSS region transcription start site region 89000
Cpgi21614 9 41935738 to 41935929 191 CpG island CpG island 21614
Cpgi21615 9 41950633 to 41951475 842 CpG island CpG island 21615
Sorl1 9 41964718 to 42124289 159571 - protein coding gene sortilin-related receptor, LDLR class A repeats-containing
Tssr89001 9 41985633 to 41985647 14 - TSS region transcription start site region 89001
Tssr89002 9 41985789 to 41985799 10 - TSS region transcription start site region 89002
Tssr89003 9 41988239 to 41988269 30 - TSS region transcription start site region 89003
D9Bwg1411e 9 41995328 to 41995596 268 DNA segment DNA segment, Chr 9, Brigham & Women's Genetics 1411 expressed
Tssr89004 9 42022419 to 42022430 11 - TSS region transcription start site region 89004
Gm16214 9 42022615 to 42034113 11498 + antisense lncRNA gene predicted gene 16214
Tssr89005 9 42033912 to 42033928 16 - TSS region transcription start site region 89005
Tssr89006 9 42069937 to 42069977 40 - TSS region transcription start site region 89006
Tssr84537 9 42076509 to 42076544 35 + TSS region transcription start site region 84537
Tssr84538 9 42095000 to 42095027 27 + TSS region transcription start site region 84538
Tssr89007 9 42097980 to 42097983 3 - TSS region transcription start site region 89007
Tssr89008 9 42098009 to 42098037 28 - TSS region transcription start site region 89008
D9Mit45 9 42117488 to 42117677 189 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 45
Tssr89009 9 42120326 to 42120369 43 - TSS region transcription start site region 89009
Tssr2834 9 42120429 to 42120469 40 + TSS region transcription start site region 2834