MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:41752138-41976283

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Obq5	9	28592037 to 41888030	13295993		QTL	obesity QTL 5
Gm46143	9	41760332 to 41765145	4813	+	lncRNA gene	predicted gene, 46143
6720432D03Rik	9	41803159 to 41805683	2524	-	lncRNA gene	RIKEN cDNA 6720432D03 gene
Gm35940	9	41804553 to 41834517	29964	+	lncRNA gene	predicted gene, 35940
Gm36032	9	41852138 to 41876283	24145	-	lncRNA gene	predicted gene, 36032
Tssr2833	9	41876197 to 41876205	8	-	TSS region	transcription start site region 2833
Tssr88999	9	41876213 to 41876218	5	-	TSS region	transcription start site region 88999
Gm48814	9	41876319 to 41879401	3082	+	bidirectional promoter lncRNA gene	predicted gene, 48814
Tssr84536	9	41885232 to 41885237	5	+	TSS region	transcription start site region 84536
Gm40513	9	41886627 to 41890549	3922	-	lincRNA gene	predicted gene, 40513
D9Mit328	9	41887849 to 41888030	181		DNA segment	DNA Segment, Chr 9 Massachusetts Institute of Technology 328
Cpgi21613	9	41890287 to 41890870	583		CpG island	CpG island 21613
Gm36170	9	41890583 to 41892399	1816	+	lncRNA gene	predicted gene, 36170
Gm40514	9	41906023 to 41910606	4583	-	protein coding gene	predicted gene, 40514
Gm36227	9	41911949 to 41919313	7364	-	lncRNA gene	predicted gene, 36227
Tssr89000	9	41934051 to 41934053	2	-	TSS region	transcription start site region 89000
Cpgi21614	9	41935738 to 41935929	191		CpG island	CpG island 21614
Cpgi21615	9	41950633 to 41951475	842		CpG island	CpG island 21615
Sorl1	9	41964718 to 42124289	159571	-	protein coding gene	sortilin-related receptor, LDLR class A repeats-containing