MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:40325240-40365255

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr84443	9	40327255 to 40327258	3	+	TSS region	transcription start site region 84443
Tssr88895	9	40333260 to 40333301	41	-	TSS region	transcription start site region 88895
Cpgi21592	9	40333420 to 40333677	257		CpG island	CpG island 21592
Tssr84444	9	40333452 to 40333463	11	+	TSS region	transcription start site region 84444
Tssr84445	9	40333470 to 40333473	3	+	TSS region	transcription start site region 84445
1700110K17Rik	9	40333472 to 40343337	9865	+	antisense lncRNA gene	RIKEN cDNA 1700110K17 gene
Tssr88896	9	40339580 to 40339612	32	-	TSS region	transcription start site region 88896
Tssr88897	9	40341497 to 40341536	39	-	TSS region	transcription start site region 88897
Tssr84446	9	40341553 to 40341590	37	+	TSS region	transcription start site region 84446
Gm48129	9	40341618 to 40342103	485	-	sense intronic lncRNA gene	predicted gene, 48129
Gm48127	9	40342308 to 40342938	630	-	sense intronic lncRNA gene	predicted gene, 48127
Tssr88898	9	40345216 to 40345221	5	-	TSS region	transcription start site region 88898
Tssr88899	9	40345240 to 40345255	15	-	TSS region	transcription start site region 88899
Tssr88900	9	40346115 to 40346131	16	-	TSS region	transcription start site region 88900
Tssr88901	9	40346189 to 40346200	11	-	TSS region	transcription start site region 88901
Tssr88902	9	40346205 to 40346233	28	-	TSS region	transcription start site region 88902
Tssr88903	9	40346295 to 40346337	42	-	TSS region	transcription start site region 88903
Gm48114	9	40363217 to 40366902	3685	-	unclassified gene	predicted gene, 48114