MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:36874825-37164849

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fez1	9	36821891 to 36878927	57036	+	protein coding gene	fasciculation and elongation protein zeta 1 (zygin I)
Pknox2	9	36890979 to 37147327	256348	-	protein coding gene	Pbx/knotted 1 homeobox 2
Tssr88815	9	36923619 to 36923628	9	-	TSS region	transcription start site region 88815
D9Mit252	9	36969136 to 36969250	114		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 252
Gm34652	9	36972672 to 36979931	7259	+	lncRNA gene	predicted gene, 34652
Tssr2826	9	37008198 to 37008200	2	+	TSS region	transcription start site region 2826
Gm3896	9	37015758 to 37020671	4913	+	antisense lncRNA gene	predicted gene 3896
Tssr88816	9	37019825 to 37019849	24	-	TSS region	transcription start site region 88816
n-R5s82	9	37026399 to 37026507	108	+	rRNA gene	nuclear encoded rRNA 5S 82
Lmr2	9	37032110 to 50199840	13167730		QTL	leishmaniasis resistance 2
D9Mit67	9	37032110 to 37032229	119		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 67
Pvcan2	9	37032110 to 37032229	119		QTL	protection against vaginal candidiasis 2
Gm34538	9	37034688 to 37069714	35026	+	lncRNA gene	predicted gene, 34538
Gm48716	9	37118656 to 37120064	1408	+	antisense lncRNA gene	predicted gene, 48716
D9Mit247	9	37132907 to 37133055	148		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 247
Gm48717	9	37138553 to 37139624	1071	-	unclassified gene	predicted gene, 48717
Cpgi21567	9	37145148 to 37147580	2432		CpG island	CpG island 21567
Tssr88817	9	37147257 to 37147323	66	-	TSS region	transcription start site region 88817