Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:35366199-35562652

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Mit225 9 35369524 to 35369634 110 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 225
Cpgi21557 9 35420978 to 35422250 1272 CpG island CpG island 21557
Cdon 9 35421199 to 35507652 86453 + protein coding gene cell adhesion molecule-related/down-regulated by oncogenes
Tssr84342 9 35421541 to 35421616 75 + TSS region transcription start site region 84342
Tssr84343 9 35421625 to 35421637 12 + TSS region transcription start site region 84343
Tssr84344 9 35421643 to 35421681 38 + TSS region transcription start site region 84344
Tssr84345 9 35423391 to 35423407 16 + TSS region transcription start site region 84345
Tssr84346 9 35423582 to 35423589 7 + TSS region transcription start site region 84346
Tssr84347 9 35424875 to 35424888 13 + TSS region transcription start site region 84347
Tssr84348 9 35424919 to 35424940 21 + TSS region transcription start site region 84348
Tssr84349 9 35424958 to 35424984 26 + TSS region transcription start site region 84349
D9Mit127 9 35452182 to 35452326 144 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 127
Gm25630 9 35474885 to 35475046 161 + snRNA gene predicted gene, 25630
Gm24188 9 35503588 to 35503695 107 - rRNA gene predicted gene, 24188
Gm1113 9 35509222 to 35518269 9047 - protein coding gene predicted gene 1113
Ddx25 9 35541848 to 35558470 16622 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 25
Tssr88739 9 35544701 to 35544705 4 - TSS region transcription start site region 88739
Tssr88740 9 35546820 to 35546842 22 - TSS region transcription start site region 88740
Cpgi21558 9 35558171 to 35558853 682 CpG island CpG island 21558
Tssr88741 9 35558397 to 35558451 54 - TSS region transcription start site region 88741
Tssr88742 9 35558459 to 35558476 17 - TSS region transcription start site region 88742
Tssr88743 9 35558505 to 35558518 13 - TSS region transcription start site region 88743
Tssr88744 9 35558522 to 35558548 26 - TSS region transcription start site region 88744
Pus3 9 35558595 to 35567401 8806 + protein coding gene pseudouridine synthase 3
Cpgi21559 9 35559307 to 35559660 353 CpG island CpG island 21559
Tssr84350 9 35559460 to 35559493 33 + TSS region transcription start site region 84350
Hyls1 9 35560821 to 35570069 9248 - protein coding gene HYLS1, centriolar and ciliogenesis associated