MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:34806452-35046575

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13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kirrel3	9	34485848 to 35036315	550467	+	protein coding gene	kirre like nephrin family adhesion molecule 3
Gm33561	9	34823247 to 34854379	31132	-	lncRNA gene	predicted gene, 33561
Gm45955	9	34860082 to 34870544	10462	-	lncRNA gene	predicted gene, 45955
Kirrel3os	9	34918233 to 34929509	11276	-	antisense lncRNA gene	kirre like nephrin family adhesion molecule 3, opposite strand
D9Mit66	9	34926452 to 34926575	123		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 66
Tlf	9	34926452 to 37395074	2468622		QTL	T lymphocyte fraction
Tssr88706	9	34948786 to 34948799	13	-	TSS region	transcription start site region 88706
Tssr2820	9	34948829 to 34948836	7	-	TSS region	transcription start site region 2820
Gm23702	9	34960019 to 34960148	129	+	rRNA gene	predicted gene, 23702
Tssr2821	9	35000441 to 35000446	5	+	TSS region	transcription start site region 2821
Tssr88707	9	35005776 to 35005818	42	-	TSS region	transcription start site region 88707
Cpgi21548	9	35017599 to 35017939	340		CpG island	CpG island 21548
Cpgi21549	9	35034857 to 35035288	431		CpG island	CpG island 21549