MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:26985175-27140315

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Acad8	9	26974138 to 26999551	25413	-	protein coding gene	acyl-Coenzyme A dehydrogenase family, member 8
Cpgi21512	9	26999071 to 26999734	663		CpG island	CpG island 21512
Bglu19	9	26999472 to 26999472	0		QTL	blood glucose level 19
Tssr88568	9	26999491 to 26999557	66	-	TSS region	transcription start site region 88568
Tssr84159	9	26999668 to 26999686	18	+	TSS region	transcription start site region 84159
Tssr84160	9	26999699 to 26999733	34	+	TSS region	transcription start site region 84160
Thyn1	9	26999710 to 27007336	7626	+	protein coding gene	thymocyte nuclear protein 1
Vps26b	9	27007771 to 27030065	22294	-	protein coding gene	VPS26 retromer complex component B
Gm48673	9	27021553 to 27024921	3368	-	unclassified gene	predicted gene, 48673
Cpgi21513	9	27029107 to 27031049	1942		CpG island	CpG island 21513
Tssr88569	9	27029988 to 27030004	16	-	TSS region	transcription start site region 88569
Tssr88570	9	27030010 to 27030114	104	-	TSS region	transcription start site region 88570
Tssr84161	9	27030159 to 27030197	38	+	TSS region	transcription start site region 84161
Ncapd3	9	27030175 to 27095315	65140	+	protein coding gene	non-SMC condensin II complex, subunit D3
Tssr84162	9	27030718 to 27030772	54	+	TSS region	transcription start site region 84162
6720417O19Rik	9	27095942 to 27097356	1414		unclassified gene	RIKEN cDNA 6720417O19 gene
Jam3	9	27097384 to 27155421	58037	-	protein coding gene	junction adhesion molecule 3
Gm48796	9	27098551 to 27102343	3792	+	antisense lncRNA gene	predicted gene, 48796