MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:22159493-22250583

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi21481	9	22164613 to 22165326	713		CpG island	CpG island 21481
Gm18227	9	22169688 to 22170504	816	+	pseudogene	predicted gene, 18227
Rpl15-ps3	9	22185607 to 22186221	614	-	pseudogene	ribosomal protein L15, pseudogene 3
Tssr88477	9	22186259 to 22186260	1	-	TSS region	transcription start site region 88477
Cpgi21482	9	22187978 to 22188603	625		CpG island	CpG island 21482
Tssr84081	9	22188137 to 22188149	12	+	TSS region	transcription start site region 84081
Zfp872	9	22188166 to 22202123	13957	+	protein coding gene	zinc finger protein 872
Tssr84082	9	22196778 to 22196783	5	+	TSS region	transcription start site region 84082
Gm18228	9	22204493 to 22205583	1090	+	pseudogene	predicted gene, 18228
1810064F22Rik	9	22206786 to 22213860	7074	-	antisense lncRNA gene	RIKEN cDNA 1810064F22 gene
Tssr88478	9	22213850 to 22213866	16	-	TSS region	transcription start site region 88478
Cpgi21483	9	22225533 to 22226136	603		CpG island	CpG island 21483
Tssr84083	9	22225702 to 22225730	28	+	TSS region	transcription start site region 84083
Zfp809	9	22225714 to 22243354	17640	+	protein coding gene	zinc finger protein 809
Tssr84084	9	22225733 to 22225760	27	+	TSS region	transcription start site region 84084
Gm48478	9	22228978 to 22231302	2324	+	unclassified gene	predicted gene, 48478
Tssr84085	9	22239805 to 22239819	14	+	TSS region	transcription start site region 84085
Tssr88479	9	22240088 to 22240094	6	-	TSS region	transcription start site region 88479
Zfp599	9	22247430 to 22259895	12465	-	protein coding gene	zinc finger protein 599