Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:21683624-21763657

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smarca4 9 21616169 to 21704230 88061 + protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
Tssr84043 9 21695621 to 21695625 4 + TSS region transcription start site region 84043
Gm26511 9 21717616 to 21723450 5834 - lincRNA gene predicted gene, 26511
Cpgi21450 9 21723139 to 21724441 1302 CpG island CpG island 21450
Ldlr 9 21723576 to 21749919 26343 + protein coding gene low density lipoprotein receptor
Tssr84044 9 21723604 to 21723615 11 + TSS region transcription start site region 84044
Tssr84045 9 21723624 to 21723657 33 + TSS region transcription start site region 84045
Tssr84046 9 21735667 to 21735674 7 + TSS region transcription start site region 84046
Tssr84047 9 21743998 to 21744013 15 + TSS region transcription start site region 84047
Tssr84048 9 21748429 to 21748448 19 + TSS region transcription start site region 84048
Spc24 9 21755442 to 21760303 4861 - protein coding gene SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
Cpgi21451 9 21759792 to 21760706 914 CpG island CpG island 21451
Tssr88407 9 21760275 to 21760294 19 - TSS region transcription start site region 88407
Tssr88408 9 21760298 to 21760316 18 - TSS region transcription start site region 88408