MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:20735050-20850067

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Olfm2	9	20667691 to 20746307	78616	-	protein coding gene	olfactomedin 2
Gm39299	9	20738791 to 20746153	7362	+	lncRNA gene	predicted gene, 39299
Cpgi21400	9	20745702 to 20746594	892		CpG island	CpG island 21400
Tssr88327	9	20746233 to 20746251	18	-	TSS region	transcription start site region 88327
Tssr88328	9	20746262 to 20746280	18	-	TSS region	transcription start site region 88328
Tssr88329	9	20746318 to 20746339	21	-	TSS region	transcription start site region 88329
Tssr88330	9	20746347 to 20746368	21	-	TSS region	transcription start site region 88330
Tssr88331	9	20746384 to 20746401	17	-	TSS region	transcription start site region 88331
Gm35860	9	20749265 to 20759126	9861	-	lncRNA gene	predicted gene, 35860
Col5a3	9	20770050 to 20815067	45017	-	protein coding gene	collagen, type V, alpha 3
Gm26274	9	20807034 to 20807354	320	+	unclassified non-coding RNA gene	predicted gene, 26274
Cpgi21401	9	20814852 to 20815310	458		CpG island	CpG island 21401
Tssr88332	9	20814993 to 20814998	5	-	TSS region	transcription start site region 88332
Tssr88333	9	20815014 to 20815029	15	-	TSS region	transcription start site region 88333
Tssr88334	9	20815048 to 20815069	21	-	TSS region	transcription start site region 88334
Tssr83923	9	20818490 to 20818506	16	+	TSS region	transcription start site region 83923
Rdh8	9	20818503 to 20826117	7614	+	protein coding gene	retinol dehydrogenase 8
Cpgi21402	9	20831050 to 20831209	159		CpG island	CpG island 21402
Gm39300	9	20833445 to 20853928	20483	-	lncRNA gene	predicted gene, 39300