Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:120939454-121311187

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctnnb1 9 120933400 to 120960507 27107 + protein coding gene catenin (cadherin associated protein), beta 1
Tssr87759 9 120950162 to 120950193 31 + TSS region transcription start site region 87759
Mir7090 9 120955086 to 120955147 61 + miRNA gene microRNA 7090
Tssr87760 9 120955160 to 120955173 13 + TSS region transcription start site region 87760
Tssr87761 9 120959552 to 120959573 21 + TSS region transcription start site region 87761
Tssr87762 9 120959832 to 120959858 26 + TSS region transcription start site region 87762
Tssr87763 9 120959961 to 120959978 17 + TSS region transcription start site region 87763
Tssr87764 9 120960006 to 120960039 33 + TSS region transcription start site region 87764
Ulk4 9 120964454 to 121286187 321733 - protein coding gene unc-51-like kinase 4
Tssr87765 9 120970725 to 120970765 40 + TSS region transcription start site region 87765
Gm34945 9 120991972 to 121000221 8249 + lncRNA gene predicted gene, 34945
Tssr92035 9 121044883 to 121044900 17 - TSS region transcription start site region 92035
D9Mit282 9 121060715 to 121060838 123 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 282
Tssr87766 9 121128507 to 121128511 4 + TSS region transcription start site region 87766
Gm18229 9 121194911 to 121196048 1137 + pseudogene predicted gene, 18229
Gm22987 9 121242342 to 121242587 245 + unclassified non-coding RNA gene predicted gene, 22987
Gm17157 9 121247317 to 121247664 347 + pseudogene predicted gene 17157
Gm34735 9 121267769 to 121270346 2577 - lncRNA gene predicted gene, 34735
Cpgi22511 9 121276966 to 121278083 1117 CpG island CpG island 22511
Tssr92036 9 121277160 to 121277217 57 - TSS region transcription start site region 92036
Tssr92037 9 121277676 to 121277687 11 - TSS region transcription start site region 92037
Gm34655 9 121277796 to 121279883 2087 + bidirectional promoter lncRNA gene predicted gene, 34655
Cpgi22512 9 121285663 to 121285963 300 CpG island CpG island 22512
Tssr92038 9 121285958 to 121285971 13 - TSS region transcription start site region 92038
Cpgi22513 9 121296874 to 121298147 1273 CpG island CpG island 22513
Tssr87767 9 121297496 to 121297552 56 + TSS region transcription start site region 87767
Trak1 9 121297507 to 121474919 177412 + protein coding gene trafficking protein, kinesin binding 1
Tssr87768 9 121297561 to 121297574 13 + TSS region transcription start site region 87768
Tssr87769 9 121298746 to 121298757 11 + TSS region transcription start site region 87769
Tssr87770 9 121298776 to 121298800 24 + TSS region transcription start site region 87770
Tssr87771 9 121300709 to 121300714 5 + TSS region transcription start site region 87771