Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:119996322-120116327

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33800 9 119985406 to 120012150 26744 + lncRNA gene predicted gene, 33800
Cpgi22490 9 120002119 to 120002324 205 CpG island CpG island 22490
Tssr87701 9 120002345 to 120002357 12 + TSS region transcription start site region 87701
Tssr87702 9 120002372 to 120002386 14 + TSS region transcription start site region 87702
Gm47043 9 120004037 to 120005106 1069 + lincRNA gene predicted gene, 47043
Tssr3052 9 120004842 to 120004853 11 + TSS region transcription start site region 3052
Tssr92004 9 120009184 to 120009190 6 - TSS region transcription start site region 92004
Gm49427 9 120009805 to 120011448 1643 + lincRNA gene predicted gene, 49427
Cpgi22491 9 120010924 to 120011680 756 CpG island CpG island 22491
Tssr92005 9 120011191 to 120011233 42 - TSS region transcription start site region 92005
Tssr92006 9 120012757 to 120012770 13 - TSS region transcription start site region 92006
Tssr92007 9 120012836 to 120012846 10 - TSS region transcription start site region 92007
Tssr92008 9 120012860 to 120012879 19 - TSS region transcription start site region 92008
Tssr87703 9 120013042 to 120013077 35 + TSS region transcription start site region 87703
Xirp1 9 120013755 to 120023598 9843 - protein coding gene xin actin-binding repeat containing 1
Tssr92009 9 120023558 to 120023574 16 - TSS region transcription start site region 92009
Cx3cr1 9 120048683 to 120068296 19613 - protein coding gene chemokine (C-X3-C motif) receptor 1
Tssr92010 9 120056322 to 120056327 5 - TSS region transcription start site region 92010
Tssr92011 9 120068263 to 120068291 28 - TSS region transcription start site region 92011
Tssr92012 9 120068292 to 120068301 9 - TSS region transcription start site region 92012
Gm33858 9 120068788 to 120070302 1514 + antisense lncRNA gene predicted gene, 33858
Tssr87704 9 120074815 to 120074826 11 + TSS region transcription start site region 87704
Tssr92013 9 120091125 to 120091153 28 - TSS region transcription start site region 92013
Tssr87705 9 120091379 to 120091427 48 + TSS region transcription start site region 87705
Tssr92014 9 120091982 to 120092014 32 - TSS region transcription start site region 92014
Tssr87706 9 120092106 to 120092121 15 + TSS region transcription start site region 87706
Ccr8 9 120092133 to 120094906 2773 + protein coding gene chemokine (C-C motif) receptor 8
Tssr87707 9 120094926 to 120094937 11 + TSS region transcription start site region 87707
Gm47050 9 120095663 to 120097838 2175 + unclassified gene predicted gene, 47050
Cpgi22492 9 120110242 to 120110933 691 CpG island CpG island 22492
Tssr87708 9 120110349 to 120110418 69 + TSS region transcription start site region 87708
Slc25a38 9 120110399 to 120124342 13943 + protein coding gene solute carrier family 25, member 38
Tssr87709 9 120110497 to 120110508 11 + TSS region transcription start site region 87709
Tssr92015 9 120110740 to 120110772 32 - TSS region transcription start site region 92015
Tssr87710 9 120114897 to 120114956 59 + TSS region transcription start site region 87710
Tssr87711 9 120114962 to 120114978 16 + TSS region transcription start site region 87711
Tssr87712 9 120114993 to 120115008 15 + TSS region transcription start site region 87712
Tssr87713 9 120116237 to 120116246 9 + TSS region transcription start site region 87713